Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0091 ATGGGCGAACATGAGGGGTGGGCACAGCCCTCTGGTAGTCTATTGCCAAATGGCCTGTTGCCTGATGAAGCTGCCTCGGTAATTCGAGTGCTTGGCTCAGAGAGATGGTTGAAGGCTGAAGAAAGGACTGCAGAGCTAATTACCTGCATTCAGCCTAATCCACCCTCTGAAGAACGTCGAAGTGCAGTTGCTGACTATGTGCAGCGGCTGATCATGAAGTGCTTCCCCTGCCAGGTGTTCACCTTTGGGTCTGTGCCCCTCAAGACTTATTTGCCTGATGGAGATATCGACTTAACGGCATTCAGTAAAAATCAAAATTTGAAGGATACATGGGCACATCAGGTTCGTGACATGCTGGAGGGTGAGGAGACGAATGAGCATGCAGAGTTCCATGTGAAAGAAGTTCAGTACATCCAGGCTGAAGTGAAAATTATAAAATGTCTTGTTGAAAATATTGTGGTTGACATATCATTTAACCAGCTTGGAGGGTTGTGTACTCTTTGTTTTCTTGAGGAGGTTGATAATCTGATTAACCAAAATCATTTATTCAAGCGTAGTATCATATTGATAAAAGCCTGGTGTTATTACGAGAGCCGCATACTTGGTGCCCACCATGGACTCATCTCAACTTATGCATTAGAAACTTTGGTTCTTTACATATTTCATGTTTTCAACAATTCTTTTGCTGGACCACTTGAGGTATTGTATCGTTTCCTGGAGTTTTTTAGTAAGTTTGACTGGGATAATTTCTGTGTAAGCCTATGGGGTCCTGTACCGATTAGTTCTCTACCAGATGTCACAGCTGAACCTCCTCGAAAGGATGGTGGAGATTTACTGCTTAGCAAGTTATTTCTTGATGCTTGTAGCTCAGTTTACGCTGTTTTCCCTGGCGGCCAAGAAAATCAAGGGCAAACCTTTGTTTCCAAGCATTTTAATGTTATTGATCCTTTGCGTGTGAACAATAACCTTGGTCGTAGTGTCAGCAAAGGTAATTTCTACAGGATACGTAGTGCTTTTGCATTTGGGGCTAAAAAGCTTGCTAGACTCCTTGATTGCCCAAAGGAGGACTTATATTCTGAAGTCAATCAGTTCTTTACGAACACTTGGGACAGACATGGAAATGGGCAGCGTCCTGATGCTCCAAGCAATGACTTGTGGCGCTTGAGATTATCTAATCATGATCAATTACAGGGGTCTGATAATCTCAGGAAAAACAGCAAAAAAATTGATAATATCACCAATCGTGAATACCAAGCTGAAAGGACACACAGTTCACGAAGTGGCCCATCTCATCATGGTAGCTCATTTAAGAGTAGTGATGCTTCTACTGTGTCACATACACAAAGTCTAAAGGGCCATAGCAACCAAAACAATTTAAGGACCTCTGACCAGGTCAGAAGGGAAATCAGTTCTAATCAGGTTGCTTATGTTGATAAAGGTAAGCAAAATGTTAAACCCAGTAATCCAATGATTGATATTCAAGGAAGATTTCTATTTGCAAGAACCCGCTCCAGTCCTGAGCTGACTGATTCATATGATGAAGTTTCTTCCCAAGGAAGGTTTGCTAGGGCCCAAGAAAGTGGGGAAGGGCAGAATTCCTCTGCAAGGTTGAATAACAGTAGTAGGAGGGATCTTGAATCTGACATGGCCTCAAGCCATGGTATTAGAATTGATGATATATCTGCTACTCGTGTATCGCCCAGTCATGTCCTAGATGATGCTGTTGATTCAAATAGTGGCGCAAATAGTTACCACGGTGACTCAGGTCCTGGCCTAATGAGTGGCGATTTTGTGTCTCTGGCTGGAACAGGAGCATCTCAGATGATGCTTCAGGAGGAGCAAGATCTTTTGAACATGATGGCATCTTCAACACCTCATGGTTTCAGTGATCAGGTTCATGTTCCTGTGAATTTAGCTCCAGGTCATCTACCCCTTCCATTTCCACCTACAATTCTTGCATCAATGGGATATGCGCAGCAAAATTTGGGTAATATTCCCTTTATTGACACTTCCTGGGGTACAAATATGCAGTTCCCTCAAGGTTTAGTCCGTTCTTCATTGACTCCATATTTCCCTGGATTCAGATTGACTTCAAATCCTGAAGATACAATTGAAACTGGTAATGATAATTTTAGTGCTGTTGAAATGAATCCAGCAGAAGCTGATAGTGATTTCTGGCATGAGCAAGAAAGGGGTTCTGCTACTGAGGTTGAAGTTGATAATGGGATTCTGGTTGATAAACAACAGTCAACTTCTGGTAGTTATACCTTTGTTTCATCATCCCAAGTAAGCAGCTCTGGTAGTTCTGGTGGAAATCAACAGAAGTTCACTAAAGAAAACAGAGGATTTACGAGAGAAGAACACATTGATACTTTACAATATGAAGATAGCAGAGGAAATGAGGTTTGTTTCGATGATAGAAAGGCAAATTCCAGGTTAACCAGTGCTCCTTTAAGTTCCAAGAGTAAAACTTCCTCTGAAAGCTCTTGGGATGGATCACCAACAAAGTTTTCCAAATCACCAAAGGAAAAAAGAGGTAGGAAGAATATCCCCTCAGGGGTATCAACTGGTTATGGAAAGGGTAAGGATGTATCGGAAACGTCATCTAATCTGGCAGATGATGAAAACAGAGAAATGACTTCTCTTTCAACAACTAATATGGCAGAAAGAAGTACAGGTGCCCCAGCTGTTGCTTCCATGCATGTTCCGAGGCATCAAGTACCTGGATTTGAACCAATTCAGACAAGTGGATCAGAGCCACGGATGCCTATAACTCCAGTGCTTTTAGGAGCAGGTTCTCGCCAAAGAGCAGTTGACAATTCTGGGGTCGTTCCATTTGCATTTTATCCTACGGGGCCACCTGTACCCTTTTTAACTATGCTTCCAGTGTATAATTTTCTGACTGAGTCAGGAACTTCTGACACATTGACAGGCAATTTTAATGGGGAAGAATTGGTGGATAACAGTGATTCCAGTCAGAATTTTGATTCATCTGAGGGGTATGAACAGCCTGAGGTTTCGAGCCCTCCTAATTCTATTAGAAGGGCCACTTTTGAGTCACCAGAGTACAAGTCTGACATTCTTAACAGTGACTTTGCAAGCCATTGGCAAAATTTGCAATATGGGCGGGTTTGTCAAAACTCACGTCATCCACCTTCAATGATCTATCCTTCACCCGTGCCTCCCGTTTATTTACAGGGTCGTTTTCCTTGGGACGGTCCTGGAAGACCCCTTTCAAGTAACATGAATCTTTTTGCTCAGCTTATGAACTATGGGCCACGGTTAGTTCCTGTTGCTCCTCTTCAGTCGGTTTTGAACAGACCTGCCAATATTTACCAACGTTTTGCGGATGAGATGCCCCGTTATCGAAGTGGCACTGGAACATACCTGCCAAATCCTAAAGTTTCTGCTCGAGATCGACAATCTACAAACCGAAGAGGAAATTACAACTATGACAGAAGTGAACACCATGGCGACAGGGAAGGAAACTGGAATATGAGCTCAAAGTTGCGAGCAACTGGACGTGGTCATAATCGCTTCCAATCTGAGAGGCCAAATTCAAAGCCAGATAGGTTGGCAACAAGTGAGAGCCGAGCCGAAAGGCCATGGCAGTCACATAGACATGACTCCTCCATGTCTTACCACAATCGGAATGGTCCAGTACGCTCAAATTCCTCACGGAACAGTTCTTCCAATGTGGCTTATGGGATGTATTCTCTGCCTGGCTTGAACCCCAGTGGGGTATCATCAAATGGACCAACAATGCCATCTGTTGTAATGCTATACCCATATGATCATAATGCTGGCTACAGTTCACCAGCAGAACATCTGGAGTTTGGATCTTTTGGACCTATGGGTTTCTCAGGTGTTCATGAACTATCACTGAATGAGGGAAGCGGATCTGGGGGAGCATTTGAGGAGCAGAGGTTTCATGGAGGTTCTACTCAACGATCCTCACCAGATCAACCCTCTTCACCCCACCTCTCAAGGTAG 3993 0.4348 MGEHEGWAQPSGSLLPNGLLPDEAASVIRVLGSERWLKAEERTAELITCIQPNPPSEERRSAVADYVQRLIMKCFPCQVFTFGSVPLKTYLPDGDIDLTAFSKNQNLKDTWAHQVRDMLEGEETNEHAEFHVKEVQYIQAEVKIIKCLVENIVVDISFNQLGGLCTLCFLEEVDNLINQNHLFKRSIILIKAWCYYESRILGAHHGLISTYALETLVLYIFHVFNNSFAGPLEVLYRFLEFFSKFDWDNFCVSLWGPVPISSLPDVTAEPPRKDGGDLLLSKLFLDACSSVYAVFPGGQENQGQTFVSKHFNVIDPLRVNNNLGRSVSKGNFYRIRSAFAFGAKKLARLLDCPKEDLYSEVNQFFTNTWDRHGNGQRPDAPSNDLWRLRLSNHDQLQGSDNLRKNSKKIDNITNREYQAERTHSSRSGPSHHGSSFKSSDASTVSHTQSLKGHSNQNNLRTSDQVRREISSNQVAYVDKGKQNVKPSNPMIDIQGRFLFARTRSSPELTDSYDEVSSQGRFARAQESGEGQNSSARLNNSSRRDLESDMASSHGIRIDDISATRVSPSHVLDDAVDSNSGANSYHGDSGPGLMSGDFVSLAGTGASQMMLQEEQDLLNMMASSTPHGFSDQVHVPVNLAPGHLPLPFPPTILASMGYAQQNLGNIPFIDTSWGTNMQFPQGLVRSSLTPYFPGFRLTSNPEDTIETGNDNFSAVEMNPAEADSDFWHEQERGSATEVEVDNGILVDKQQSTSGSYTFVSSSQVSSSGSSGGNQQKFTKENRGFTREEHIDTLQYEDSRGNEVCFDDRKANSRLTSAPLSSKSKTSSESSWDGSPTKFSKSPKEKRGRKNIPSGVSTGYGKGKDVSETSSNLADDENREMTSLSTTNMAERSTGAPAVASMHVPRHQVPGFEPIQTSGSEPRMPITPVLLGAGSRQRAVDNSGVVPFAFYPTGPPVPFLTMLPVYNFLTESGTSDTLTGNFNGEELVDNSDSSQNFDSSEGYEQPEVSSPPNSIRRATFESPEYKSDILNSDFASHWQNLQYGRVCQNSRHPPSMIYPSPVPPVYLQGRFPWDGPGRPLSSNMNLFAQLMNYGPRLVPVAPLQSVLNRPANIYQRFADEMPRYRSGTGTYLPNPKVSARDRQSTNRRGNYNYDRSEHHGDREGNWNMSSKLRATGRGHNRFQSERPNSKPDRLATSESRAERPWQSHRHDSSMSYHNRNGPVRSNSSRNSSSNVAYGMYSLPGLNPSGVSSNGPTMPSVVMLYPYDHNAGYSSPAEHLEFGSFGPMGFSGVHELSLNEGSGSGGAFEEQRFHGGSTQRSSPDQPSSPHLSR 1330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0091 1330 MobiDBLite consensus disorder prediction 1176 1213 - -
Lele40g0091 1330 MobiDBLite consensus disorder prediction 1214 1230 - -
Lele40g0091 1330 CDD NT_PAP_TUTase 59 166 - -
Lele40g0091 1330 MobiDBLite consensus disorder prediction 396 463 - -
Lele40g0091 1330 MobiDBLite consensus disorder prediction 1311 1330 - -
Lele40g0091 1330 MobiDBLite consensus disorder prediction 1294 1330 - -
Lele40g0091 1330 Gene3D - 162 360 - -
Lele40g0091 1330 MobiDBLite consensus disorder prediction 813 836 - -
Lele40g0091 1330 FunFam PAP/OAS1 substrate-binding domain superfamily 162 358 - -
Lele40g0091 1330 MobiDBLite consensus disorder prediction 874 892 - -
Lele40g0091 1330 MobiDBLite consensus disorder prediction 1122 1230 - -
Lele40g0091 1330 SUPERFAMILY PAP/OAS1 substrate-binding domain 182 352 - -
Lele40g0091 1330 MobiDBLite consensus disorder prediction 975 1014 - -
Lele40g0091 1330 MobiDBLite consensus disorder prediction 507 552 - -
Lele40g0091 1330 MobiDBLite consensus disorder prediction 428 463 - -
Lele40g0091 1330 Gene3D Beta Polymerase, domain 2 52 161 IPR043519 -
Lele40g0091 1330 MobiDBLite consensus disorder prediction 756 784 - -
Lele40g0091 1330 MobiDBLite consensus disorder prediction 400 427 - -
Lele40g0091 1330 SUPERFAMILY Nucleotidyltransferase 35 201 IPR043519 -
Lele40g0091 1330 FunFam PAP/OAS1 substrate-binding domain superfamily 52 161 - -
Lele40g0091 1330 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 17 1329 - -
Lele40g0091 1330 MobiDBLite consensus disorder prediction 813 893 - -
Lele40g0091 1330 MobiDBLite consensus disorder prediction 507 540 - -
Lele40g0091 1330 MobiDBLite consensus disorder prediction 1139 1164 - -
Lele40g0091 1330 MobiDBLite consensus disorder prediction 756 778 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0091 Lele-ChrLele40 667320 673998 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele40g0091 40 667320 673998 Lele40g0091 40 667320 673998 ECH
Lele39g1341 39 21758636 21764848 Lele40g0091 40 667320 673998 ECH
Lele37g0087 37 714808 724120 Lele40g0091 40 667320 673998 hybridization
Lele38g0092 38 704689 711852 Lele40g0091 40 667320 673998 hybridization