Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0092 ATGGGCGAACATGAGGGGTGGGCACAGCCCTCTGGTAGTCTATTGCCAAATGGCCTGTTGCCTGATGAAGCTGCCTCAGTAATTCGAGTGCTTGACTCAGAGAGATGGTTGAAGGCTGAAGAAAGGACTGCAGAGCTAATTACCTGCATTCAGCCTAATCCACCCTCTGAAGAACGTCGAAGTGCAGTTGCTGACTATGTGCAGCGGCTGATCATGAAGTGCTTCCCCTGCCAGGTGTTCACCTTTGGGTCTGTGCCCCTCAAGACTTATTTGCCTGATGGAGATATCGACTTAACGGCATTCAGTAAAAATCAAAATTTGAAGGATACATGGGCACATCAGGTACGTGACATGCTGGAAGGTGAGGAGAAGAACGAGCATGCAGAGTTCCATGTGAAAGAAGTTCAGTACATCCAGGCTGAAGTGAAGATTATAAAATGCCTTGTTGAAAATATTGTGGTTGACATATCATTTAACCAGCTTGGAGGGTTGTGTACCCTTTGTTTTCTTGAGGAGGTTGATAATCTGATTAACCAAAATCATTTATTCAAGCGTAGTATCATATTGATAAAAGCCTGGTGTTATTACGAGAGCCGCATACTTGGTGCCCACCATGGACTCATCTCAACTTATGCATTAGAAACTTTGGTTCTTTACATATTTCATATTTTCAACAATTCTTTTGCTGGACCACTTGAGGTATTGTATCGTTTCCTGGAGTTTTTTAGTAAGTTTGACTGGGATAATTTCTGCGTAAGCCTATGGGGTCCCGTACTCATTAGTTCTCTCCCAGATGTTACAGCTGAACCTCCTCGAAAGGATGGTGGAGATTTACTGCTTAGCAAGTTATTTCTTGATGCTTGTAGCTCAGTTTACGCTGTTTTCCCTGGCGGCCAAGAAAATCAAGGGCAAACCTTTGTTTCCAAGCATTTTAATGTTATTGATCCTTTGCGTGTGAACAATAACCTTGGTCGTAGTGTCAGCAAAGGTAATTTCTACAGGATACGTAGTGCTTTTGCATTTGGGGCTAAAAAGCTTGCTAGACTCCTTGATTGCCCAAAGGAGGACTTATATTCTGAAGTCAATCAGTTCTTTATGAACACTTGGGACAGACATGGAAATGGGCAGCGTCCTGATGCTCCAAGCAATGACTTGTGGCGCTTGAGATTATCTAATCATGATCAATTACAGGGGTCTGATAATCTCAGGGAAAAGAGCAAAAAAATTGATAATATCACCAATCGTGAATACCAAGCTGAAAGGACACACAGTTCACGAAGTGGCCCATCTCATCATGGTAGCTCATTTAAGAGTAGTGATGCTTCTACTGTGTCACATACACAAAGTCTAAAGGTCCATAGCAACCAAAACAATTTAAGGACCTCTGACCAGGTCAGAAGGGAAATCAGTTCTAATCAGGTTGCTTATGTTGATAAAGGTAAGCAAAATGTTAAACCCAGTAATCCAATGATTGATATTCAAGGAAGATTTCTATTTGCAAGAACCCGCTCCAGTCCTGAGCTGACTGATTCATATGAAGAAGTTTCTTCCCAAGGAAGGTTTGCAAGGGCCCAAGAAAGTGGGGAAGGGCAGAATTCCTCTGCAAGGTTGGATAATAGTTGTAGGAGGAATCTTGAATCTGACATGGCCTCAAGCCATGGTATTAGAATTGATGATATATCTGCTACTCGTGTATCGCCCGGTCATGTCCTAGATGATGATGCTGATTCAAACAGTGGCTCAAATAGTTACCACGGTGACTCATGTCCTGGCCTAATGAGTGGCGATTTTGTGTCTATGGCTGGAACAGGAGCATCTCAGATGATGCTTCAGGAGGAGCAAGATCTTTTGAACATGATGGCATCTTCAACAGCTCATGGTTTCAGTGATCAGGTTCATGTTCCTGTGAATTTAGCTCCAGGTCATCTACCCCTTCCATTTCCACCTACAATTCTTGCATCAATGGGATATGCGCAGCAAAATTTGGGTAACATTCCCTTGATCGACACTTCATGGGGTACAAATATGCAGTTTCCTCAAGGTTTAGTTCCTTCTTCATTGACTCCATATTTCCCTGGCATCAGATTGACTTCAAATCCTGAAGATACAATTGAAACTGGTAATGATAATTTTAGTGCTGTTGAAATGAATCCAGCAGAAGCTGATAGTGATTTCTGGCATGAGCAAGAAAGGGGTTCTGCTACTGAGGTTGAAGTTGATAATGGGATTCTGGATGATAAACAACAGTCAACTTCTGGTAGTTATACTTTTGTTTCATCATCCCAAGTAAGCAGCTCTGGTAGTTCTGGTAGAAATCTACAGAAGTTCACTAAAGAAAACAGAGGATTTACGAGAGAAGAACACATTGATACTTTCCAATATGAAGATAGCAGAGGAAATGAGGTTTGTTTCGATGATAGAATGACAAATTCTAGGTTAACCAGTGCTCCTTTAAGTTCCAAGAGTAAAACTTCCTCTGAAAGCTCTTGGGATGGATCACCAACAAAGTTTTCGAAATCAACAAAGGAAAAAAGAGGTAGGAAGAATATCCCCTCAGGGGTATCAACTGGTTATGGAAAGGGTAAGGATGTATCGGAAACGTCATCTAATCTGGCAGATGATGAAAACAGAGAAAGGACTTCTCTTTCAACGACTAATATGGCAGAAAGAAGTACAGGGGCCCCAGCTGTTGCTTCCATGCATGTTCCGAGGCATCAAGTACCTGGATTTGAACCAATTCGGACAAGTGGTTCAGATCCACGGATACCTATAACTCCAGTGCTTTTAGGAGCAGGTTCTCGCCAAAGAGCAGTTGATAATTCTGGGGTCGTTCCATTTGCATTTTATCCTACGGGGCCACCTGTACCCTTTTTAACTATGCTTCCAGTGTATAATTTTCTGACCGAGTCAGGAACTTCTGACACATTGACAGGCAATTTTAATGGGGAAGAATTGGTGGATAACAGTGATTCCAGTCAGAATTTTGATTCATCTGAGGGGTATGAACAGCCTGAGGTGTCGAGCCCTCCTAATTCTATTAGAAGGGCAACTTTTGAGTCATCAGAGCACAAGTCTGACATTCTTAACAGTGACTTTGCAAGCCATTGGCAAAATTTGCAATATGGACGGTTTTGTCAAAACTCACGTCATCCACCTTCAATGATCTATCCTTCACCCGTGCCTCCCGTTTATTTGCAGGGTCGTTTTCCTTGGGACGGTCCTGGAAGACCCCCTTCAAGTAACATGAATCTTTTTGCTCAGCTTATAAACTATGGGCCAAGGTTATTTCCTGTTTCTCCTCTTCAGTCGGTTTTGAACAGACCTGCCAATATTTACCAACGTTTTGCGGATGAGATGCCACGTTATCGAAGTGGCACTGGAACATACCTGCCAAATCCTAAAGTTTCTGCTCGAGATCGACAATCTACAAACCGAAGAGGAAATTACAACTATGACATAAGTGAACACCATGGCGACAGGGAAGGAAACTGGAATATGAGCTCAAAGATGCGAGCAACAGGACGTGGTCATAATCGCTTCCAAACTGAGAGGCCAAATTCAAAGCCAGATAGGTTGGCAACAAGTGAGAGGCGAGCTGAAAGGCCATGGCGGTCACATAGACACGACTCCTCCATGTCTTACCACAATCGGAATGCTCCAGTACGCTCAAATTCCTCACAGAACAGTTCTTCCAATTTGGCTTATGGGATGTATTCTCTGCCTGGCTTGAACCCCAGTGGGGTCTCATCAAATGGACCAACAATGCCATCTGTTGTAATGCTATACCCATATGATCATAATGCTGGCTACAGTTCACTAGCAGAACATCTGGAGTTTGGATCTTTTGGACCTATGGGTTTCTCAGGTGTTCACGAACTATCACTGAATGAGAGAAGCCGATCTGGTGGAGCATTTGAGGAGCAGAGGTTTCATGGAGGTTCTGCTCAACGATCCTCACCAGATCAACCCTCTTCACCCCACCTCTCAAGGTGCTTTCATGAGTATGTTTTTTTTTTGGATGAATTTATGGCACGGTGGAACCAACAATCAAAGGTGACATTGATTAATTTGCCAGATCAGTGGCCAAGGAGTGATTACAGGTTGAAGGAGGAGGATATTCTGCCTCCTTATTACCTTGGAGGCAAGCTGAATGGAGAAAACTAG 4164 0.4311 MGEHEGWAQPSGSLLPNGLLPDEAASVIRVLDSERWLKAEERTAELITCIQPNPPSEERRSAVADYVQRLIMKCFPCQVFTFGSVPLKTYLPDGDIDLTAFSKNQNLKDTWAHQVRDMLEGEEKNEHAEFHVKEVQYIQAEVKIIKCLVENIVVDISFNQLGGLCTLCFLEEVDNLINQNHLFKRSIILIKAWCYYESRILGAHHGLISTYALETLVLYIFHIFNNSFAGPLEVLYRFLEFFSKFDWDNFCVSLWGPVLISSLPDVTAEPPRKDGGDLLLSKLFLDACSSVYAVFPGGQENQGQTFVSKHFNVIDPLRVNNNLGRSVSKGNFYRIRSAFAFGAKKLARLLDCPKEDLYSEVNQFFMNTWDRHGNGQRPDAPSNDLWRLRLSNHDQLQGSDNLREKSKKIDNITNREYQAERTHSSRSGPSHHGSSFKSSDASTVSHTQSLKVHSNQNNLRTSDQVRREISSNQVAYVDKGKQNVKPSNPMIDIQGRFLFARTRSSPELTDSYEEVSSQGRFARAQESGEGQNSSARLDNSCRRNLESDMASSHGIRIDDISATRVSPGHVLDDDADSNSGSNSYHGDSCPGLMSGDFVSMAGTGASQMMLQEEQDLLNMMASSTAHGFSDQVHVPVNLAPGHLPLPFPPTILASMGYAQQNLGNIPLIDTSWGTNMQFPQGLVPSSLTPYFPGIRLTSNPEDTIETGNDNFSAVEMNPAEADSDFWHEQERGSATEVEVDNGILDDKQQSTSGSYTFVSSSQVSSSGSSGRNLQKFTKENRGFTREEHIDTFQYEDSRGNEVCFDDRMTNSRLTSAPLSSKSKTSSESSWDGSPTKFSKSTKEKRGRKNIPSGVSTGYGKGKDVSETSSNLADDENRERTSLSTTNMAERSTGAPAVASMHVPRHQVPGFEPIRTSGSDPRIPITPVLLGAGSRQRAVDNSGVVPFAFYPTGPPVPFLTMLPVYNFLTESGTSDTLTGNFNGEELVDNSDSSQNFDSSEGYEQPEVSSPPNSIRRATFESSEHKSDILNSDFASHWQNLQYGRFCQNSRHPPSMIYPSPVPPVYLQGRFPWDGPGRPPSSNMNLFAQLINYGPRLFPVSPLQSVLNRPANIYQRFADEMPRYRSGTGTYLPNPKVSARDRQSTNRRGNYNYDISEHHGDREGNWNMSSKMRATGRGHNRFQTERPNSKPDRLATSERRAERPWRSHRHDSSMSYHNRNAPVRSNSSQNSSSNLAYGMYSLPGLNPSGVSSNGPTMPSVVMLYPYDHNAGYSSLAEHLEFGSFGPMGFSGVHELSLNERSRSGGAFEEQRFHGGSAQRSSPDQPSSPHLSRCFHEYVFFLDEFMARWNQQSKVTLINLPDQWPRSDYRLKEEDILPPYYLGGKLNGEN 1387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0092 1387 MobiDBLite consensus disorder prediction 1176 1213 - -
Lele38g0092 1387 MobiDBLite consensus disorder prediction 1214 1230 - -
Lele38g0092 1387 CDD NT_PAP_TUTase 59 166 - -
Lele38g0092 1387 FunFam PAP/OAS1 substrate-binding domain superfamily 162 358 - -
Lele38g0092 1387 MobiDBLite consensus disorder prediction 1150 1164 - -
Lele38g0092 1387 MobiDBLite consensus disorder prediction 730 782 - -
Lele38g0092 1387 MobiDBLite consensus disorder prediction 1129 1149 - -
Lele38g0092 1387 MobiDBLite consensus disorder prediction 975 1020 - -
Lele38g0092 1387 MobiDBLite consensus disorder prediction 397 464 - -
Lele38g0092 1387 SUPERFAMILY PAP/OAS1 substrate-binding domain 182 352 - -
Lele38g0092 1387 MobiDBLite consensus disorder prediction 509 537 - -
Lele38g0092 1387 Gene3D - 162 360 - -
Lele38g0092 1387 MobiDBLite consensus disorder prediction 744 777 - -
Lele38g0092 1387 MobiDBLite consensus disorder prediction 567 587 - -
Lele38g0092 1387 MobiDBLite consensus disorder prediction 813 836 - -
Lele38g0092 1387 MobiDBLite consensus disorder prediction 428 464 - -
Lele38g0092 1387 MobiDBLite consensus disorder prediction 1123 1230 - -
Lele38g0092 1387 MobiDBLite consensus disorder prediction 975 1016 - -
Lele38g0092 1387 MobiDBLite consensus disorder prediction 813 893 - -
Lele38g0092 1387 FunFam PAP/OAS1 substrate-binding domain superfamily 52 161 - -
Lele38g0092 1387 SUPERFAMILY Nucleotidyltransferase 31 201 IPR043519 -
Lele38g0092 1387 MobiDBLite consensus disorder prediction 398 427 - -
Lele38g0092 1387 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 17 1329 - -
Lele38g0092 1387 Gene3D Beta Polymerase, domain 2 52 161 IPR043519 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0092 Lele-ChrLele38 704689 711852 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0092 38 704689 711852 Lele38g0092 38 704689 711852 ECH
Lele37g0087 37 714808 724120 Lele38g0092 38 704689 711852 ECH
Lele38g0092 38 704689 711852 Lele39g1341 39 21758636 21764848 hybridization
Lele38g0092 38 704689 711852 Lele40g0091 40 667320 673998 hybridization