LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele39g1250	ATGAAGGAATCCCAGTTGCGCGCTTTATATCTCTTGCATCAACAGCAATTAGGGCTTTTGGGTGTTTGGAACCGAACATTTAACGAGTTGTCGTTGTCCTTTGTGAATTCCACGGTTTATTGGAACTCGACTTCTCAAGTGCAGGGTGTGAATCGCTGGACTGAGCCATTGTTGGAAGATCTTAAATATCTGTTATTTAAGCGGATTTCTTTGAATAGAGAGATTCAAGAGGTTTTGTTGTCTCCTCATAGGACAGTGGGCTTGGTTGAACCTGAATTTAATTTTGGGAATGATAGTTTTGTTGGTGATGTACGGTATGATAGATGTAGAACTTTGAATCAGCAACTTTCACAAAGAAGAACAATCGAGTGGAAGCCAAAGGGTGATAAGTTTTTGCTGGCTATATGCGTTTCAGGTCAGATGTCCAACCATCTGATTTGCTTAGAGAAGCATATTGTTTTCGCGGCTCTTAGTCGGCTTCTGGTGGAAGCAATGTTGGACAAGACTATATGTGCTTTGTCTAGTGTGTTCATTGGAGCCTCTGGTTGCACTTTCACTGAAGACATCCTGAGGATTAGAAAGGATTGGGGATCGGCCTTATTATGTGATGAGCACCCATGCCAAGGATCTTCTTGCTTTTCTTCTCGGGAAACAAACCCAGAGCATGAAAAAGAAGCTGCTTTGAGGGCACAGATCAGGTTTCTTACACTCTGTGTGAAAGAAAAACAGTACTTGAAAAAGAAGGATCAAGGCGATGTCGATGGCACACAAAACCTATGGGCTTGTGAGCATTTATTAGTAGGCCGATTTTATGAAATCAATCATTCCGAGCTTCCGCTTAAATGCCCAGATCATTTAAAGATTGTCCGTGTTGTCATGTGGATCCAGCTCAGTAATATGGGAGAGTTTAAAGTGTCGGTTAGGTACCCAAGCATGCAGTCTCTTCGCATGCAGTTCAGCGATGCGGACTATAGGAAACCAGACAAAAAGAAGATCCCTGCACTTGACGAGAAGTATGTGATGGAATCTGGATTTGCCAGTAATGCGCTAACCAGGAGAGTCTCAGCGGAGGAGTTAGCGGAAAGAGGAAACTCATGGAGTTTCTGGATTACAACCTCTGAAGAAAATCAAACGAGCAAAAGCCCATTGTTCATTCACGAGGAAATGAATCCGATTTCCAAGAAGGGATCCTGTTGGTCTCAGCTCAAGTATTCTGGAATGATGCAGTGGGGTAAGCGTCGATCAGTTCGATTCTTAGGTCAGCATAAGAAGAACAGTTCAGAATCTTTATCAGGATCCGCGAAAGACACTGGGTTAGATGCAAATGAACAAAATGAGAGTGGGCAAATGACTGATAGAAAGAGAAAGAAATGTGAAGAAAAAGAGCTTACAGAGGAAGTGTCAAATGAATTCAGGACGACTCGTATAAATAAGAGAAATCAAAATGAATGTGGTAAGGTTCAAAGATTGAAGAAAGCACAACATCGCAAGCAGAATCAACATGCAGTATACAACAAAAAGAAGCATAAAAGTTCAATTGACAGATGGTCTGCCGAGAGGTATAAGTTAGCAGAGGAGAACATGTTAAAGGTGATGAAAGTTAAAGGAGCAGTTTTTGGAAAACCAATGTTGAGGCCAGCCTTGAGATCAGAGGCTCGAAAGCTGATAGGTGATACAGGTTTACTGGATCATTTGCTGAAGCACATGGCCGGAAAAGTGGCCCCCGGCGGAACTGAGAGATTTCGACGGCGACACAATGCTGAGGGAGCGATGGAATATTGGTTGGAGAGTGCGGATTTGGTTAAAATTAGACAAGAAGCAGGGGTTCAAGATCCCTATTGGACTCCACCCCCTGGATGGACACTTGGGGACGACCCTTCCCAGGATCCCATTTGTGCTAGAGAACTTCGAGAGATAAAAGAAGAAATGTCTGAATTGAAACATGAAATGCAACAATTGGTATCCAAGAAGAGGGAGGAAGAATTGGCTATTGTGACTACAGCGAATTCTTGTTTGTCAAATAACACCAATATGGAAAAAGGTGGTTCCTTGATTACAGTGCAGGAGATGTATAAAGAGTTGGTGAACAAGAAATCTAAAATTGAGGAACAACTAAAGGATATTTCCATAGCTTTGAGTGATATGGAGAGTGCAACTGCTACAGAAAGGAGGAAAAGGAAATGGAAAACTTGTCATCCTCCATCTGAAAGAAGAAAGGGGGTGGAATATAGCCGTTTTGGATGCTCGACTTGTTCGCCGAAGACTGAGGCATGTGGCCATGAGTTCCGAGTTATAGGCCTCCGGCCACTTGTGGTTCTTACAACTTGTAAATGGAGTAGTGCAATTTTGAATGCAAGGGCACCTGAACTTAGGTGCCACGATATATATGAATATTATTTGCCTTGGGCAATTCTTCTAGTCCGTGATTGCTATTGTTGTCAGAGGAACAATAATCCACAAGAAATACTTATATGGTTCAATTTCAATGCTTCCACTGACCTCTTCCTTTGCCGTACGTTTTACCTTTGCCTAATGTCCCGTTCTTCTGGAATTTATTTCGAGCTTATTCTCATTGGAGAGCCCTTCAGTGAGAGGCTGTTTCGACTAGTCTCGGATTCCTCAATCAAGGATGCTACCAATAAGAAGGAAATTGAGCAAAAGGACTCTAGAAATGAAAAACATAATTCGCCTGAGCCATATTGGGTGTTTAAGCCGTCTGAGGAACTCGAGAATCTAGCCCGTGGTGATGAAAATGATGATGGTCTTAGTCAATGTGCCATCAAGAGGATTTGCAAGATCTATGACTTGGACACCAATGATGTCACAAAGTACAGGTGGCTTGGTTAG	2847	0.4254	MKESQLRALYLLHQQQLGLLGVWNRTFNELSLSFVNSTVYWNSTSQVQGVNRWTEPLLEDLKYLLFKRISLNREIQEVLLSPHRTVGLVEPEFNFGNDSFVGDVRYDRCRTLNQQLSQRRTIEWKPKGDKFLLAICVSGQMSNHLICLEKHIVFAALSRLLVEAMLDKTICALSSVFIGASGCTFTEDILRIRKDWGSALLCDEHPCQGSSCFSSRETNPEHEKEAALRAQIRFLTLCVKEKQYLKKKDQGDVDGTQNLWACEHLLVGRFYEINHSELPLKCPDHLKIVRVVMWIQLSNMGEFKVSVRYPSMQSLRMQFSDADYRKPDKKKIPALDEKYVMESGFASNALTRRVSAEELAERGNSWSFWITTSEENQTSKSPLFIHEEMNPISKKGSCWSQLKYSGMMQWGKRRSVRFLGQHKKNSSESLSGSAKDTGLDANEQNESGQMTDRKRKKCEEKELTEEVSNEFRTTRINKRNQNECGKVQRLKKAQHRKQNQHAVYNKKKHKSSIDRWSAERYKLAEENMLKVMKVKGAVFGKPMLRPALRSEARKLIGDTGLLDHLLKHMAGKVAPGGTERFRRRHNAEGAMEYWLESADLVKIRQEAGVQDPYWTPPPGWTLGDDPSQDPICARELREIKEEMSELKHEMQQLVSKKREEELAIVTTANSCLSNNTNMEKGGSLITVQEMYKELVNKKSKIEEQLKDISIALSDMESATATERRKRKWKTCHPPSERRKGVEYSRFGCSTCSPKTEACGHEFRVIGLRPLVVLTTCKWSSAILNARAPELRCHDIYEYYLPWAILLVRDCYCCQRNNNPQEILIWFNFNASTDLFLCRTFYLCLMSRSSGIYFELILIGEPFSERLFRLVSDSSIKDATNKKEIEQKDSRNEKHNSPEPYWVFKPSEELENLARGDENDDGLSQCAIKRICKIYDLDTNDVTKYRWLG	948

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele39g1250	948	MobiDBLite	consensus disorder prediction	422	459	-	-
	Lele39g1250	948	MobiDBLite	consensus disorder prediction	881	900	-	-
	Lele39g1250	948	MobiDBLite	consensus disorder prediction	422	446	-	-
	Lele39g1250	948	Coils	Coil	633	663	-	-
	Lele39g1250	948	MobiDBLite	consensus disorder prediction	881	897	-	-
	Lele39g1250	948	Coils	Coil	684	718	-	-
	Lele39g1250	948	Gene3D	-	148	202	-	-
	Lele39g1250	948	PANTHER	PROTEIN DYAD	264	725	IPR044221	GO:0007131\|GO:0051177\|GO:0051321

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele39g1250	Lele-ChrLele39	21044448	21057010	Dispersed/Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lele39g1250	39	21044448	21057010	Lele39g1250	39	21044448	21057010	ECH
	Lele37g0171	37	1407475	1416234	Lele39g1250	39	21044448	21057010	hybridization
	Lele38g0180	38	1454637	1458544	Lele39g1250	39	21044448	21057010	hybridization