Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0180 ATGTTGATCTTTGTGACTGGGATGATAGGCAGCGTTTTGTTTGTTTGTGATGTGTTTTATATGCTCAAGACAAAGTTAGCCAAGTTATTCCCCGTTTACTCCCTCTGTTTGGTTGGCTATTTGCTTCTTCACCGGGCTTCCTCTCTCATCCTCCGTCGTCACCACCACGGCATTGGCACTCACTCATTCCCATTTCAGTTTCCATTGAGCCACACTCACCGACTCAACGATTCATTGCCATTGTTGTCCGTTGATTCTAGCTCTTCCTCTTGCCTCCAAGTGAGCCACTCAGTTGCTCCCGATCTCGGGGCTTTTGGTTTGGTTCCCTCTACCATGGCCAAGAAGAATTCAGTTCAGAGGGATTCGTCTTCGGACGAAGAAGACGACCACCACAACCTAATCGAGCAGAACGAGAGGAAGCCACCTTCTCCCACTACCTCCACCACGTTCCACATGGAAAATTTCAGCTCTCGCATTCCCCGTTTCAATTTCAATTTCAAGTTCCAGAAGAGGTACTTATTCGCTCTTCTCCCTCTCTTCATTGTCCTATTCTATTTCACAACCGATCCCCACTCAGTCTTCCCCACCCACTCCTCTCTCAAGTTCGATTCCCTCGCCGATCAAATGAAGGAATCCCAGTTGCGCGCTTTATATCTCTTGCATCAACAGCAATTAGGGCTTTTGGGTGTTTGGAACCGAACATTTAACGAGTTGTCCTCTGTGAATTCCACGGTTAGTTTGAATTCGAGTTCTCAAATTCAGGGTGTGAATCACTCGCCGGAGCCATTGTTGGAAGATCTTAAATCTGTGTTATTTAAGCAGATTTCTTTGAATAGGGAGATTCAAGAGGTTTTGTTGTCTCCTCATAGGACAGTGGGCTTGGTTGAATCTGAATTTGATTTTGGGAATGTTAGTTTGGGCGGTGATGCACGGTATGATAGATGTAGAACGGTGGATCAGCAATTTTCACAAAGAAGAACAATCGAGTGGAAGCCAAAGGCGGATAAGTTTTTGCTGGCTATATGCGTTTCAGGTCAGATGTCTAACCATCTGATTTGCTTAGAGAAGCATATGTTCTTCGCAGCTCTTCTTAACCGGGTTTTGGTTATTCCTAGTCATAGAGTTGATTACCAATATGATAGAGTATTGGATATTGATCACATAAATAAGTGCTTGGGAAGAAAGGTCGTGATCTCCTTCGAAGATTTTTCTAGTATCGAGAAGCATCATATGCACATAAACAAGTTTTTGTGTTACTTTTCACTTCCTCAACCTTGTTTTCTTGATGAGGAACGTTTAAAGAAGTTGAAGTCATTAGGGTTGTCATTTACTAAACCTGAACCTGTTTGGAATGAGGATACTAGGAAGCCCAAGAAGAGGACGGTTCAAGATGTTCTGTCTAAGTTTGCACATGATGATGATGTGATGGCCATTGGAGATGTTTTCTTTGCTGCAGTGGAGCAAGAATGGTTAATGCAACCAGGGGGTCCAATTGCCCACCGATGCAAGACTCTTATTGAGCCCAGCCGACTTATTTTGCTGACTGCTCAGCGATTTATTCAAACATTCCTGGGAAAGAACTTCATCGCCTTACATTTTCGAAGACATGGCTTTTTGAAATTTTGTAATGTAAAAAAACCAAGTTGCTTTTACCCCATTCCTCAAGCTGCTGATTGTATCTTGCGGGTGGTTGAAAGGGCCAATGCACCTGTTATCTATCTTTCCACGGATGCAGCAGAGAGTGAAACTGGTCTACTTCAGTCACTAGTGGTACTGAATGGCAAGCCTGTTCCACTTGTTAAACGCCCAGCTCGTAATTCAGCAGAAAAATGGGATGCTTTGTTATACAGGCATCATATTGAGGGGGACTCTCAGGTGGAAGCAATGTTGGACAAGACTATATGTGCTTTGTCTAGTGTGTTCATTGGAGCCTCTGGTTCCACTTTCACTGAAGACATCTTGAGGCTTAGAAAGGATTGGGGATCAGCATCATTATGTGATGAGTACCTATGCCAAGGTGAGGAACCTAATATTGTGGCTGAAATAGAATGA 2052 0.4366 MLIFVTGMIGSVLFVCDVFYMLKTKLAKLFPVYSLCLVGYLLLHRASSLILRRHHHGIGTHSFPFQFPLSHTHRLNDSLPLLSVDSSSSSCLQVSHSVAPDLGAFGLVPSTMAKKNSVQRDSSSDEEDDHHNLIEQNERKPPSPTTSTTFHMENFSSRIPRFNFNFKFQKRYLFALLPLFIVLFYFTTDPHSVFPTHSSLKFDSLADQMKESQLRALYLLHQQQLGLLGVWNRTFNELSSVNSTVSLNSSSQIQGVNHSPEPLLEDLKSVLFKQISLNREIQEVLLSPHRTVGLVESEFDFGNVSLGGDARYDRCRTVDQQFSQRRTIEWKPKADKFLLAICVSGQMSNHLICLEKHMFFAALLNRVLVIPSHRVDYQYDRVLDIDHINKCLGRKVVISFEDFSSIEKHHMHINKFLCYFSLPQPCFLDEERLKKLKSLGLSFTKPEPVWNEDTRKPKKRTVQDVLSKFAHDDDVMAIGDVFFAAVEQEWLMQPGGPIAHRCKTLIEPSRLILLTAQRFIQTFLGKNFIALHFRRHGFLKFCNVKKPSCFYPIPQAADCILRVVERANAPVIYLSTDAAESETGLLQSLVVLNGKPVPLVKRPARNSAEKWDALLYRHHIEGDSQVEAMLDKTICALSSVFIGASGSTFTEDILRLRKDWGSASLCDEYLCQGEEPNIVAEIE 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0180 683 CDD O-FucT_like 497 657 - -
Lele38g0180 683 PANTHER GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 2 199 681 IPR045130 GO:0036066|GO:0046922
Lele38g0180 683 MobiDBLite consensus disorder prediction 116 150 - -
Lele38g0180 683 Pfam GDP-fucose protein O-fucosyltransferase 357 657 IPR019378 -
Lele38g0180 683 Gene3D - 504 667 - -
Lele38g0180 683 FunFam O-fucosyltransferase family protein 502 671 - -
Lele38g0180 683 MobiDBLite consensus disorder prediction 119 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0180 Lele-ChrLele38 1454637 1458544 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0180 38 1454637 1458544 Lele38g0180 38 1454637 1458544 ECH
Lele38g0180 38 1454637 1458544 Lele39g1250 39 21044448 21057010 hybridization