Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g1234 ATGGTTCTAGAGTTGATTAAGTCAAGTTGTGCAGAGAGCTCAATGAAGAATGTTGGTCTGAGGCTTCTTCCTCAGATCACTGCAAGTTGTAACGACAAATCCAATGTCCTCCTGAAATCTGCCATTATAAACAAACTGCTGCAGACCAGCAGGCCTTTGTTAGAGGACTTCTGCTACCTTAAAACTTGTAACCTCTGCAATAAGAAGCTCAGTCCAGACAAAGATATCTACATGTACAGAGGAGATCAAGGATTCTGCAGCATAGAGTGCAGGAACAGGCAGATAATCATGGACGACATGAAAGAGTTGGAGAGCTCAAGGAAGAAGACGGCGTCGTGTTATAGACATTGCTGGAACGAGTCTCGTCGCCTCGAGACTCGCCTCATCCTCGAGGACCTTCAAAAGCAGAGACTCAAGTCCTCTAAGCCTATTTCTCGACACCATCAAGATCACTGGGCAATTATTTCCTAG 471 0.4522 MVLELIKSSCAESSMKNVGLRLLPQITASCNDKSNVLLKSAIINKLLQTSRPLLEDFCYLKTCNLCNKKLSPDKDIYMYRGDQGFCSIECRNRQIIMDDMKELESSRKKTASCYRHCWNESRRLETRLILEDLQKQRLKSSKPISRHHQDHWAIIS 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g1234 156 ProSiteProfiles Zinc finger FLZ-type profile. 58 102 IPR007650 -
Lele39g1234 156 PANTHER FCS-LIKE ZINC FINGER 17 8 146 IPR044181 -
Lele39g1234 156 Pfam zinc-finger of the FCS-type, C2-C2 56 100 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g1234 Lele-ChrLele39 20949032 20949729 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele39g1234 39 20949032 20949729 Lele39g1234 39 20949032 20949729 ECH
Lele37g0188 37 1510189 1510843 Lele39g1234 39 20949032 20949729 hybridization
Lele38g0195 38 1554241 1554890 Lele39g1234 39 20949032 20949729 hybridization