Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0195 ATGATGGTTCCAGAGTTGAGTAAGTCTAGTTATGCAGAGAGCTCCAAGAATGTTGGTCTGAGGCTTCTTCCTCAGATTACTGCAAGTTCTAACAACATATTCAATAATGTCCTTCTGAAATCTGCCATTAGAAACGGAAACCCCACCAGCAGGCCTTTATTAGAGGACTTCTGCTACCTTAAAACTTGTAACCTCTGCAATAAGAAGCTCATTCCAGACAAAGATATCTACATGTACAGAGGAGATCAAGGATTCTGCAGCATAGAGTGCAGGAACAGGCAGATAGTGATGGACGACATGAAAGAGTTAGAGAGCTCAAGGAAGAAGAAGATGGTAACGTCGTCTTCGTCGTCGTCTTCTTATAGAAATTGCTGGAATGAGTCTCGTCGCCTTGAAACTCGTCTCATCCTCAAGGACCTTCAAATGAATAGGCTCAAGTCTTCCCAGCCTATTCCTTATCATCAAAATCACCGGGCAATTGTTTCCTAG 489 0.4294 MMVPELSKSSYAESSKNVGLRLLPQITASSNNIFNNVLLKSAIRNGNPTSRPLLEDFCYLKTCNLCNKKLIPDKDIYMYRGDQGFCSIECRNRQIVMDDMKELESSRKKKMVTSSSSSSSYRNCWNESRRLETRLILKDLQMNRLKSSQPIPYHQNHRAIVS 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0195 162 Pfam zinc-finger of the FCS-type, C2-C2 56 100 IPR007650 -
Lele38g0195 162 PANTHER FCS-LIKE ZINC FINGER 17 8 156 IPR044181 -
Lele38g0195 162 ProSiteProfiles Zinc finger FLZ-type profile. 58 102 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0195 Lele-ChrLele38 1554241 1554890 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0195 38 1554241 1554890 Lele38g0195 38 1554241 1554890 ECH
Lele38g0195 38 1554241 1554890 Lele39g1234 39 20949032 20949729 hybridization