Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0994 ATGTTCTATGGTGCGGTGGTCTGGGACCCTTGGCTTATTGTCGCTCAAATTGTGTGTCTCCAATGTTTATATTATATAACTCTTGGAGTGTTCTTGTCGATACTTGTCGGTACTCGCGTATCTCGGTTAAGCCTCGTATATTTCTTTGATTATGTGACCATCACGACCTCGACCGTTACTGGTTGGTGTGTTATTGCCTCATTTCTACTCAGCTCTTTTGCAGGGTCTGTATATATGCTTTATCTAGTTGAAAGGGCAAAGAAATGCTTGGATTTTTCAGCCACCCTCTACATCATCCATCTTTTTATCTGCATTGTTTATGGTGGTTGGCCATCTTCTATCACTTGGTGGATTATTAATGGTACTGGAATTGCTGTGATGACACTATTAGGCGAATATTTGTGCATCAAACGTGAGCTCCGGGAGATACCAATAACACGATCACGTTCAATGTCAGATTTGGATATGGTGGTTCTGAGTGAAAGGGCAAAGAAATGCTTGGATTTTTCAGCCCTCCTCTACATCATCCTTCTTTTTATATACATTATGTATGGTGGTTGGCCATCTTCTATCACTTGGTGGATTGTGAATGGTACTGGAGCTGTGATGGCACTATTAGGTAAATATTTGAGCATCAACCGTGAGCTCCGGGAGATACTAATAACACGATTACGTTCAAGTGTTTGA 687 0.4134 MFYGAVVWDPWLIVAQIVCLQCLYYITLGVFLSILVGTRVSRLSLVYFFDYVTITTSTVTGWCVIASFLLSSFAGSVYMLYLVERAKKCLDFSATLYIIHLFICIVYGGWPSSITWWIINGTGIAVMTLLGEYLCIKRELREIPITRSRSMSDLDMVVLSERAKKCLDFSALLYIILLFIYIMYGGWPSSITWWIVNGTGAVMALLGKYLSINRELREILITRLRSSV 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0994 228 PANTHER SYS1 155 226 IPR019185 -
Lele39g0994 228 Pfam Integral membrane protein S linking to the trans Golgi network 5 144 IPR019185 -
Lele39g0994 228 Pfam Integral membrane protein S linking to the trans Golgi network 155 220 IPR019185 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0994 Lele-ChrLele39 18748288 18750063 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele39g0994 39 18748288 18750063 Lele39g0994 39 18748288 18750063 ECH
Lele37g0436 37 3551941 3553875 Lele39g0994 39 18748288 18750063 hybridization
Lele38g0404 38 3247634 3249270 Lele39g0994 39 18748288 18750063 hybridization