Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0404 ATGTTCTATGGTGCGGTGGTCTGGGACCCTTGGCTTATTGTCGCTCAAATTGTGTGTCTTCAATGTTTATATTATATAACTCTGGGAGTTTTCTTGTCGATACTTGTTGGGACTCGTGTATCTCGGTTAAGCCTTGTATATTTCTTTGATTATGTGACCATCACGACCTCGACCGTTACCGGTTGGTGTGTTATTGCCTCATTTCTGCTCAGCTCTTTTGCAGGGTCTGTATATATGCTGTATCTAGTTGAAAGGGCAAAGAAATGCTTGGATTTTTCTGCGACCCTCTACATTATCCATCTTTTTATATGCATTGTGTATGGTGGTTGGCCATCTTCTATCACTTGGTGGATTGTGAATGGTACTGGAATTGCTGTGATGGCATTATTAGGTGAATATCTGTGCATCAAACGTGAGCGCCGGGAGATACCAATAACACGATTACGTTCAAGTAAGGACTTTGTCATTTAA 471 0.414 MFYGAVVWDPWLIVAQIVCLQCLYYITLGVFLSILVGTRVSRLSLVYFFDYVTITTSTVTGWCVIASFLLSSFAGSVYMLYLVERAKKCLDFSATLYIIHLFICIVYGGWPSSITWWIVNGTGIAVMALLGEYLCIKRERREIPITRLRSSKDFVI 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0404 156 PIRSF SYS1_homolog 1 156 IPR016973 GO:0000139
Lele38g0404 156 PANTHER SYS1 1 150 IPR019185 -
Lele38g0404 156 Pfam Integral membrane protein S linking to the trans Golgi network 5 144 IPR019185 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0404 Lele-ChrLele38 3247634 3249270 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0404 38 3247634 3249270 Lele38g0404 38 3247634 3249270 ECH
Lele38g0404 38 3247634 3249270 Lele39g0994 39 18748288 18750063 hybridization
Lele38g0404 38 3247634 3249270 Lele40g0383 40 3088584 3089451 hybridization