Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0793 ATGATGAATTTTATCCAAGTGAAGCTGAGAATACCTAAAAAAGCAGATGGACAAAAGAAGTGTATAATATCAGGAGAGCCATTGCCAGAACATGAGGAACCAAAGCCTGAGAATAATGGTGGTGGTGGTGGTGGTGATTATCAGTGTAAATCCGCAAATTTAGATGCTGCAGCAGAAGCTGAGGAGGAGGACGACGATTTTATCACCAATGAGGTAAAGAGGAGGCTGAAAGAATTGAGAAGAAACAGTTTCATGGTGTTGATTCCTGAAGAAGAAGAACAGTCATGCGAGGAAGATGATGAGGAAGGAGAGGGAGAGACATGCTCTAATAATGAATGGAGGGATGTGGAAGCAGAAGGCCAACAATGGTGGCGCGGTTTCGATGCCGTGTTTGAAAAGTACTGTGAGAGAATGCTCTTCTTTGATCGTATGAGCACCCAGCAGCTTAATGAAGCAGGCAAAGAGCAATCAATGCCTTGGGAAAGATCTTGCTCCCAGTGCCCTTCTTCAACTCAGTCTCCTAGATCTGCATCAAAGAAGCTGGCATACCCGCTTCGATGTCTTTCCTCGAAACAATTTGGAGAAACCTATGATGAAACTGACCATCTTCAACAACCGCCTCAAATTGATCCCTATCAGGATCTTGAGACAGCATATGTTGGTCAGGTATGCTTGACTTGGGAGGCACTTCATTGTCAATACAGTCAAATGTGCCAGAAGGTATCTTGGCAACCAGAAAGTCCTATCTGTTACAACCAGAGTGCTCAGCAGTTTCAACAGTTCCAGGTTCTTCTACAAAGGTTCATTGAGAATGAACCTTTCGAGAAGGGTCTTAGAGCCGAAATTTATGCTCGCACGAGGAACACTTTGCCTAGACTGCTTCATGTTCCTAATGTTCAAGATCAAGTATCAACAGAAGATGATTTAGAGACGAGAGTTCTTGCTCCTGATCTTATCAGGATAATGGAAAACTCTATACTCACATTCAAACTTTTCCTGAAACGGGACAAGAAAAAGCCAAGCGGAGCGATTAACCTTGTTGGAAATCAGAACCAGCTTACAGCTCATTTACAAAAAGTTCAGTCTAGTCTTGAGAAGGTGAATTCATAAATCAATGAAATTCAAGGAATTGAGGAGAAAGAGAAAAGGCTGGAAGAAGACGTCTTGGCCCCAGAAGCAAGAGGAGATTCAGCTATTAATGGCTCTCATTGA 1212 0.429 MMNFIQVKLRIPKKADGQKKCIISGEPLPEHEEPKPENNGGGGGGDYQCKSANLDAAAEAEEEDDDFITNEVKRRLKELRRNSFMVLIPEEEEQSCEEDDEEGEGETCSNNEWRDVEAEGQQWWRGFDAVFEKYCERMLFFDRMSTQQLNEAGKEQSMPWERSCSQCPSSTQSPRSASKKLAYPLRCLSSKQFGETYDETDHLQQPPQIDPYQDLETAYVGQVCLTWEALHCQYSQMCQKVSWQPESPICYNQSAQQFQQFQVLLQRFIENEPFEKGLRAEIYARTRNTLPRLLHVPNVQDQVSTEDDLETRVLAPDLIRIMENSILTFKLFLKRDKKKPSGAINLVGNQNQLTAHLQKVQSSLEKVNSXINEIQGIEEKEKRLEEDVLAPEARGDSAINGSH 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0793 403 Coils Coil 360 369 - -
Lele39g0793 403 Pfam Protein of unknown function (DUF1666) 213 378 IPR012870 -
Lele39g0793 403 MobiDBLite consensus disorder prediction 18 37 - -
Lele39g0793 403 MobiDBLite consensus disorder prediction 91 106 - -
Lele39g0793 403 MobiDBLite consensus disorder prediction 90 113 - -
Lele39g0793 403 PANTHER DNA LIGASE (DUF1666)-RELATED 41 376 - -
Lele39g0793 403 Coils Coil 371 387 - -
Lele39g0793 403 MobiDBLite consensus disorder prediction 18 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0793 Lele-ChrLele39 16987573 16990583 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele39g0793 39 16987573 16990583 Lele39g0793 39 16987573 16990583 ECH
Lele37g0632 37 5291094 5303454 Lele39g0793 39 16987573 16990583 hybridization
Lele38g0598 38 5032002 5034451 Lele39g0793 39 16987573 16990583 hybridization