Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0778 ATGGCGGCAACCCCACCACAGGGTCCGGATCGTACAACCGAAGAGGTAGCAGCTGAACCAGACAAAATGAAGGATCAGCTTCATTCATCAATACCGGGTGGAGGCTGTCCTCTCTACCCACCTAATGTCTATGCTCCACAGGCCCAGGCTTTCTTCTACCCAGGTTTTGAAAATGCCAACGGAGAATGGGATGATTATCCTTCATATATCAATTCTGAAGGATTGGAAATAGGATCCCCTGGTCTTTACAATGATAATCCATCTCTTCTTTTCCATTCTGGATATGGCTTCAACCCACAAATGCCTTATGGACCATATTCTCCTGTGACAACACCTATGCCTTCTGTAGGTGGAGATCCACAATTATACTCCCCACAGCAATTTCCATACTCTGGGCCACCTTATTACCATCAGCTAGTTTCCCCTAGCTTATCATACATTTCTTCGCCAGCTCCAGCTTCCCAGCCAGAGCTCACTAACTTGGTAGGTGTTGATCGACCAGGTGATAGCATGGTTTTGGGACCAAGACCTGGCTATCCCTCAATGGGATCCTTCGGCAGAGGAAATGGAATCTGGTCAGATTGCTCAAAACCCTCAGAAAGGCAGATGTCCATGATGCCCCTATCACCAGCAGTATCTCCACAGCCACTTGGGTCACCTGGGTCATTTGGGCAGAGTGTTGGAATGGCTTCTCATCAACAACCACCATTGTATGGGTTTGGATCTGGTTTAAACTCCTATGGTAGAGACTATGTGCCCAACCAGTTATCTAGATTCGGTGGCACTGCCATTTCCAGTCTTGGTGTAAATGACAGGAACTGGCTTTCTCTTGAAAATAGCAGACGGCGGGACAGGGGAGTGTCTTCTTTTTGCGGTTGTGATGGTACTCATGATGTACTCAGCGAGCAGAATAGAGGTCCTAGGGCCTCAAAACTTAAGAATCACGTGTTAGCTGAAAATGTTTCTGTTGATAATAGTAAAAAGAGTGCTTCTACTATGAAGTTTCACAATGAATCAATCAACCGGCCAGAATTTATCACGGATTACAAGGATGCCAAATTTTTTGTCATCAAATCTTATAGTGAAGACAATGTCCACAAGAGCATCAAATATGGGGTCTGGGCCAGTACACCAAATGGAAATAGAAAGTTAGATGCTGCATATTGCCAAGCAAAGGAGAAGCAAGATGCCTGCCCTGTATTTCTCCTTTTTTCGGTGAATGCTAGTGCTCAGTTCTGTGGGGTGGCTGAAATGGTTGGGCCTGTTGATTTTGACAAGAGTGTAGATTACTGGCAGCAAGATAAGTGGAGCGGACAATTTCCCGTCAAGTGGAACATGGTTAAAGATGTTCCTAACAGTCAGTTTCGACACATTGTCCTTGAAAATAATGATAACAAGCCTGTGACCAACAGTCGAGATACTCAGGAGGTGAAATTGCAACAGGGGATTGAAATGTTGACCATTTTCAAGAATTATGAAGCCGAGACGTCCATCCTTGATGACTTTGATTACTATGAAGACCGGCAGAAGGCTATGCAAGAACGGAAGGCAAGGCAGCAAGCCAGCCTGATGCCTCCAATGATACCAGTTGGAGAAGGTGAACGAAAGAGTTCTGCTCCTGCTAACATAAATGGTGATTTTATGAAGCAGATGACAAAGAGCTTCGCGCAAGTTGTTCGCTTAGAAGACAATAGTACCGTTACCGATAGAGGTAGTTTAACCACTGATGCCTCCAATGGTACTGTTGTTAAAGTGGAAGATGGTATTCCTGTGACTAGCTCGTCACTCCCAACCAGTTAG 1800 0.4522 MAATPPQGPDRTTEEVAAEPDKMKDQLHSSIPGGGCPLYPPNVYAPQAQAFFYPGFENANGEWDDYPSYINSEGLEIGSPGLYNDNPSLLFHSGYGFNPQMPYGPYSPVTTPMPSVGGDPQLYSPQQFPYSGPPYYHQLVSPSLSYISSPAPASQPELTNLVGVDRPGDSMVLGPRPGYPSMGSFGRGNGIWSDCSKPSERQMSMMPLSPAVSPQPLGSPGSFGQSVGMASHQQPPLYGFGSGLNSYGRDYVPNQLSRFGGTAISSLGVNDRNWLSLENSRRRDRGVSSFCGCDGTHDVLSEQNRGPRASKLKNHVLAENVSVDNSKKSASTMKFHNESINRPEFITDYKDAKFFVIKSYSEDNVHKSIKYGVWASTPNGNRKLDAAYCQAKEKQDACPVFLLFSVNASAQFCGVAEMVGPVDFDKSVDYWQQDKWSGQFPVKWNMVKDVPNSQFRHIVLENNDNKPVTNSRDTQEVKLQQGIEMLTIFKNYEAETSILDDFDYYEDRQKAMQERKARQQASLMPPMIPVGEGERKSSAPANINGDFMKQMTKSFAQVVRLEDNSTVTDRGSLTTDASNGTVVKVEDGIPVTSSSLPTS 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0778 599 Gene3D ph1033 like domains 328 504 - -
Lele39g0778 599 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 62 563 IPR045168 -
Lele39g0778 599 Pfam YT521-B-like domain 352 490 IPR007275 GO:0003723
Lele39g0778 599 FunFam YTH domain family 1, isoform CRA_a 331 504 - -
Lele39g0778 599 MobiDBLite consensus disorder prediction 1 33 - -
Lele39g0778 599 ProSiteProfiles YTH domain profile. 352 489 IPR007275 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0778 Lele-ChrLele39 16401106 16409415 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele39g0778 39 16401106 16409415 Lele39g0778 39 16401106 16409415 ECH
Lele37g0647 37 5610598 5621340 Lele39g0778 39 16401106 16409415 hybridization
Lele38g0604 38 5106170 5115790 Lele39g0778 39 16401106 16409415 hybridization