Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0604 ATGGCAGCAACCCCACCACAGGATCCGGATCGTACAACCGAAGAGGTAGCAGCTGAACCAGACAAAATGAAGGATCAGGTAGTGCTTCATTCATCAATACCGGGTAGGTCAATTTCTTCTAATGCCTCTCAGGATGCTACCATGGCTCATTCAGGGGAGACAAGTCAATCAGGATCGTTTGTTTCAGGTGGAGGCTGTCCTCTCTACCCACCTAATGTCTATGGCCCGCAGGCCCAGGCTTTCTTTTACCCAGGTTTTGAAAATGCCAACGGAGAATGGGATGATTATCCTTCATATATCAATTCTGAAGGATTGGAAATTGGATCTCCTGGTCTCTACAATGATAATCCATCTCTTCTTTTCCATTCTGGATATGGCTTCAACCCACAAATGCCTTATGGACCATATTCTCCTGTGACAACACCTATGCCTTCTGTAGGTGGAGATCCACAATTATACTCCCCACAGCAATTTCCATACTCTGGGCCACCTTATTACCATCAGCTAGTTTCCCCTAGCTTACCATATATTTCTTCGCCAGCTCCTGCTTCCCAGCTGGAGCTCACTAACTTGGTGGGTGTTGATCGACCAGGTGATAGCATGGTTTTCGGACCAAGACCTGGCTATCCCTCAATGGGATCCTTTGGTAGAGGTAGTTTTCCTGGAGCAATTGGTTCTTTTGGCTTTCATGATTCCCAACAAGGATTTGATGGATCAAGATCTGCGGGAAATGGAATCTGGTCAGATTGCTCAAAACCCTCAGAAAGGCATATGTCCATGATGCCCCTATCACCAGCAGTATCTCCACAGCCACTTGGGCCACCTGGGTCATTTGGGCAGAGTGTTGGACTGGCTTCTCATCAACAACCACCATTGTATGGGTTTGGATCCGGTTTAAACTCCTATGGTAGAGACTATTTGCCCAACCAGGGATCTAGATTTGGTGGCTCTGCCATTTCCAGTCTTGGTGTAAATGACAGGAACTGGCTTTCTCTTGAAAATAGCAGACGGCGTGACAGGGGAATGTCTTCTTTTTGCGGTTGTGATGGTACTCATGATGTACTCAGCGAGCAGAATAGAGGTCCTAGGGCCTCAAAACTTAAGAATCACTTGTTAGCTGAAAATGTTTCTGTTGATAGTAGTAAAAAGAGTGCTTCTACTACCAAGCTCCACAATGAATCATTTAACCGGACAGAATTTATCGCAGATTACAAGGATGCCAAATTGTTTGTCATCAAATCTTATAGTGAAGATAATGTCCACAAGAGCATCAAATATGGGGTCTGGGCCAGCACTCCAAATGGAAATAGAAAGTTAGACGCTGCATATCGCCAAGCAAAGGAGAAGCAAGATGCCTGCCCTGTATTTCTCTTATTTTCGGTGAATGCTAGTGCTCAGTTCTGTGGGGTGGCTGAAATGGTTGGGCCTGTTGATTTTGACAAGAGTGTGGATTACTGGCAACAAGATAAGTGGAGCGGACAATTTCCCCTCAAGTGGCACATAGTTAAAGATGTTCCTAACAGTCAGTTTCGACACATTGTCCTTGAAAATAATGATAACAAGCCTGTGACCAACAGTCGAGATACTCAGGAGGTGAAATTGCAACAGGGGATTGAAATGTTGACCATTTTCAAGAATTATGAAGCCGAAACGTCTATCCTTGATGACTTTGATTACTATGAAGATCGGCAAAAGGCTATGCAAGAACGAAAGGCAAGGCAGCAAGCCAGCCTGATGGCTCTATCAATGGGAGAAGGTGAACGCAAGAGTTCTGCTCCTGCTAACATAAATGGTGATTTTATGAAGCAGATGACAAAGAGCTTTGCACAAGTTGTTCGCTTAGACGACAATAGTACCGAAACAACTGTTACCGATAGAGGTAGTTTAACCACTGATGCCTCCGATGGTACTGTTGTTAAGCTGGAAGATGGTATTCCTGTGACTAGCTCGTCACTCCCAACCAGTTAG 1968 0.4497 MAATPPQDPDRTTEEVAAEPDKMKDQVVLHSSIPGRSISSNASQDATMAHSGETSQSGSFVSGGGCPLYPPNVYGPQAQAFFYPGFENANGEWDDYPSYINSEGLEIGSPGLYNDNPSLLFHSGYGFNPQMPYGPYSPVTTPMPSVGGDPQLYSPQQFPYSGPPYYHQLVSPSLPYISSPAPASQLELTNLVGVDRPGDSMVFGPRPGYPSMGSFGRGSFPGAIGSFGFHDSQQGFDGSRSAGNGIWSDCSKPSERHMSMMPLSPAVSPQPLGPPGSFGQSVGLASHQQPPLYGFGSGLNSYGRDYLPNQGSRFGGSAISSLGVNDRNWLSLENSRRRDRGMSSFCGCDGTHDVLSEQNRGPRASKLKNHLLAENVSVDSSKKSASTTKLHNESFNRTEFIADYKDAKLFVIKSYSEDNVHKSIKYGVWASTPNGNRKLDAAYRQAKEKQDACPVFLLFSVNASAQFCGVAEMVGPVDFDKSVDYWQQDKWSGQFPLKWHIVKDVPNSQFRHIVLENNDNKPVTNSRDTQEVKLQQGIEMLTIFKNYEAETSILDDFDYYEDRQKAMQERKARQQASLMALSMGEGERKSSAPANINGDFMKQMTKSFAQVVRLDDNSTETTVTDRGSLTTDASDGTVVKLEDGIPVTSSSLPTS 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0604 655 FunFam YTH domain family 1, isoform CRA_a 386 559 - -
Lele38g0604 655 MobiDBLite consensus disorder prediction 618 635 - -
Lele38g0604 655 Gene3D ph1033 like domains 383 559 - -
Lele38g0604 655 MobiDBLite consensus disorder prediction 1 60 - -
Lele38g0604 655 MobiDBLite consensus disorder prediction 258 285 - -
Lele38g0604 655 MobiDBLite consensus disorder prediction 12 26 - -
Lele38g0604 655 ProSiteProfiles YTH domain profile. 407 544 IPR007275 GO:0003723
Lele38g0604 655 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 92 617 IPR045168 -
Lele38g0604 655 MobiDBLite consensus disorder prediction 618 655 - -
Lele38g0604 655 MobiDBLite consensus disorder prediction 32 60 - -
Lele38g0604 655 Pfam YT521-B-like domain 408 545 IPR007275 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0604 Lele-ChrLele38 5106170 5115790 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0604 38 5106170 5115790 Lele38g0604 38 5106170 5115790 ECH
Lele38g0604 38 5106170 5115790 Lele39g0778 39 16401106 16409415 hybridization