Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0671 ATGTCGACGCAACATCTGCGATCTTTGCCTCTTCCGAATCCATTGCTCTGTTGTAAACTGCGTGTTTCTCTCAATGCAACAACCTCTTCCTCATCATCATCATCTTCTTCTTCTCTGAAACTATATTCATCTCAAAATGGGGAAAAGGCAATTTTGACCTTAGAACAACTTCCTCCTAATGCCATTCGCCGCAAGACAGACCCACAATGGAGAGGAGGCTTCAGCCTTGGACTCGACTTGGGATTGGCTCGCACAGGCCTTGCTCTCAGTAAAGGCTTTGCTGTTCGTCCTTTGACGGTTTTGGAATTGCGAGGGCAGAAGCTTGAGGTCCAGCTTCTTAAGATTGCTGAAGAGGAGGAAGCCGATGAGTTTATTGTTGGACTTCCTAAATCTTCTGATGGGAAGGAAACACCACAATCAAACAAAGTTCGCAGCATTGCAGGAAGGCTTGCAGTTCGAGCAGCAGAGAGGGGTTGGAGAGTGTATCTACAGGATGAACATGGGACAACAACAGAAGCAATAGATCGAATGATTAACATGGGCCTCAGTAAGTCCACTCAGCAAAGGAAACAAGATGCTTTTGCTGCCATGATGGTAGTGGAGAGATATTTCCAGTTGTCAGGTGAGGGTGTTGAGCTTATATTGCCCAAGAATCTTGATCTGCAAGAAAAACTTCGAAGGGGTCCTCCCGATGACATTGATTTCTTGGATGAATTTGAGGGCTGA 726 0.4587 MSTQHLRSLPLPNPLLCCKLRVSLNATTSSSSSSSSSSLKLYSSQNGEKAILTLEQLPPNAIRRKTDPQWRGGFSLGLDLGLARTGLALSKGFAVRPLTVLELRGQKLEVQLLKIAEEEEADEFIVGLPKSSDGKETPQSNKVRSIAGRLAVRAAERGWRVYLQDEHGTTTEAIDRMINMGLSKSTQQRKQDAFAAMMVVERYFQLSGEGVELILPKNLDLQEKLRRGPPDDIDFLDEFEG 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0671 241 Pfam Holliday junction resolvase 75 205 IPR005227 GO:0006364
Lele39g0671 241 TIGRFAM RNAse_H_YqgF: putative transcription antitermination factor YqgF 76 204 IPR005227 GO:0006364
Lele39g0671 241 SMART rnase_8s 73 173 IPR006641 GO:0006139
Lele39g0671 241 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN 56 224 IPR005227 GO:0006364
Lele39g0671 241 SUPERFAMILY Ribonuclease H-like 74 205 IPR012337 -
Lele39g0671 241 FunFam Holliday junction resolvase 75 212 - -
Lele39g0671 241 Gene3D - 75 210 IPR037027 GO:0006139
Lele39g0671 241 CDD YqgF 76 205 IPR005227 GO:0006364
Lele39g0671 241 Hamap Putative pre-16S rRNA nuclease [yqgF]. 73 208 IPR005227 GO:0006364
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0671 Lele-ChrLele39 7085725 7089440 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0779 37 17147854 17151587 Lele39g0671 39 7085725 7089440 hybridization