Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0779 ATGTCGACGCAACATCTGCGATCTTTGCCTCTTCCGAATCCATTGCTCTGTTGTAAACTGCGTGTTTCTCTGAATGCAACAACCTCTTCTTCTTCATCTTCTTCTTCTTCTTCTTCTCTGAAACTATATTCATCTCAAAATGGGGCAAAGGCAATTTTGACCTTAGAACAACTTCCTCCTAATGCCATTCGCCGCAAAAGAGACCCACAATGGAGAGGAGGCTTCAGCCTTGGACTCGACTTGGGATTGGCTCGCACAGGCCTTGCCCTCAGTAAAGGCTTCGCTGTTCGTCCTTTGACGGTTTTGGAATTGCGGGGGCAGAAGCTTGAGGTCCAGCTTCTTAAGATTGCTGAAGAGGAGGAAGCCGATGAGTTTATTGTTGGACTTCCTAGATCATCTTATGGGAAGGAAACACCACAATCAAACAATGTTCGCAGCATTGCAGGAAGGCTTGCAGTTCGAGCAGCAGAGAGGGGTTGGAGAGTGTATCTACAGGATGAACATGGGACAACAACAGAAGCAATAGATCGAATGATTAACATGGGCCTCAGTAAATCCACTCAGCAAAGGAAACAAGATGCTTTTGCTGCCATGATGGTACTGGAGAGATATTTCCAGTTGTCAGGTGAGGGTGTTGAGCTTGTATTACCCAAGAATCTTGATCTGCAAGAAAAACTTCAAAGGGGTCCTCCAGATGACATTGATTTCTTGGATGAATTTGAGGGCTGA 729 0.4568 MSTQHLRSLPLPNPLLCCKLRVSLNATTSSSSSSSSSSSLKLYSSQNGAKAILTLEQLPPNAIRRKRDPQWRGGFSLGLDLGLARTGLALSKGFAVRPLTVLELRGQKLEVQLLKIAEEEEADEFIVGLPRSSYGKETPQSNNVRSIAGRLAVRAAERGWRVYLQDEHGTTTEAIDRMINMGLSKSTQQRKQDAFAAMMVLERYFQLSGEGVELVLPKNLDLQEKLQRGPPDDIDFLDEFEG 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0779 242 CDD YqgF 77 206 IPR005227 GO:0006364
Lele37g0779 242 TIGRFAM RNAse_H_YqgF: putative transcription antitermination factor YqgF 77 205 IPR005227 GO:0006364
Lele37g0779 242 FunFam Holliday junction resolvase 76 213 - -
Lele37g0779 242 SUPERFAMILY Ribonuclease H-like 75 206 IPR012337 -
Lele37g0779 242 SMART rnase_8s 74 174 IPR006641 GO:0006139
Lele37g0779 242 Gene3D - 76 211 IPR037027 GO:0006139
Lele37g0779 242 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN 56 225 IPR005227 GO:0006364
Lele37g0779 242 Pfam Holliday junction resolvase 76 206 IPR005227 GO:0006364
Lele37g0779 242 Hamap Putative pre-16S rRNA nuclease [yqgF]. 74 209 IPR005227 GO:0006364
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0779 Lele-ChrLele37 17147854 17151587 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0779 37 17147854 17151587 Lele39g0671 39 7085725 7089440 hybridization