Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0489 ATGAAAAGTCCACCTAACGTACACTCACTCACTTCCTCCGCCGAAGCCACAACACTTGTCCGACAGCAAATGAAACCCCACAACTTGTACTTCCCATCATCATCGTTGTCGTTGACAGGGTTCAACCTTGGAAAGAAATGGATGGATTACCAAGGTTTGAGCGACTGGGACACTTTGCTTGATCCACTGGACGATAATCTACGCTCCGAGATTCTCAGGTACGGCAATTTCGTCCAGGCTGCTTATCAATCCTTCAACTTCGATCCTTCTTCACCTTCCTACGCCACCGCATGTTGCTTTCCCAAGAACAAACTCTCCGACCATCGCGGGTTGCAGTGCGCCACCGGGTACAAAGTAACCAAGCACCTACGAGCAAACTCAGGGATCGAGCTACCTTGTTGGGTCGAAAAGGCACCAAGCTGGGGCGTCACCAGATCCAACAACATCGGCTACGTAGCTGTCTGTGACAACGAACAAGAGATCAAACGGCTCGGACGTCGAGATGTTGTTATTGCATATCGAGGAACAATGACTTGTTTGGAATGGCTGGAAAATTTACGTGCCAATCTCACCCATATGAATCCTGCAGAACGATTTGAAACAGAGCAGGACCACGAAGATCATACTAGAGCTATGGTGCAAAGTGGGTTTCTGAGTCTGTATACATCAGCAGCTTGTGATTCTTTGAGCCTTAAACAAATGGTCCGTGAAGAAATTCGTCGGATTATCCAAACCTACGGTGGTGAAGAAGCCCTCAGCTTGACCATCACCGGCCACAGTCTAGGGGCGGCGCTGGCAACGCTCACGGCATACGACATCAAAGCAGCCTTCAGGCTTGAGCACCGGACGCCAATGGTCACCGTGATATCGTTCGGTGGGCCCCGCGTGGGCAATGGGAGGTTCAGGCAGGAGCTAGAGAAGCAAGGGACGAAGGTTCTGCGAATAGTGAATTCTGACGATGTGGTTACGAAAGTGCCAGGGTTCGTATTTGAAGGAGATGATGATGTGGCGGATGGAAAGGGTATCCACGTGGCAAGCTGGGTCAAAAAGAAGTTGGAGGATGCGCAGTTGACTTATGCGGAGGTGGGAAAAGAGCTTCGGTTGTGTAGCAGGGATTCTCCGTACCTCAGGGGGATGAATGCGGGCACGTGTCACGATCTGAACACGTATCTCCACTTGATTGATGGCTTCGTCAGCTCCACATGTCCTTTCAGAGCCACCGCAAAGAGGTTTCTCCGCCGGTGA 1245 0.51 MKSPPNVHSLTSSAEATTLVRQQMKPHNLYFPSSSLSLTGFNLGKKWMDYQGLSDWDTLLDPLDDNLRSEILRYGNFVQAAYQSFNFDPSSPSYATACCFPKNKLSDHRGLQCATGYKVTKHLRANSGIELPCWVEKAPSWGVTRSNNIGYVAVCDNEQEIKRLGRRDVVIAYRGTMTCLEWLENLRANLTHMNPAERFETEQDHEDHTRAMVQSGFLSLYTSAACDSLSLKQMVREEIRRIIQTYGGEEALSLTITGHSLGAALATLTAYDIKAAFRLEHRTPMVTVISFGGPRVGNGRFRQELEKQGTKVLRIVNSDDVVTKVPGFVFEGDDDVADGKGIHVASWVKKKLEDAQLTYAEVGKELRLCSRDSPYLRGMNAGTCHDLNTYLHLIDGFVSSTCPFRATAKRFLRR 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0489 414 SUPERFAMILY alpha/beta-Hydrolases 68 329 IPR029058 -
Lele39g0489 414 CDD Lipase_3 150 335 - -
Lele39g0489 414 Gene3D alpha/beta hydrolase 46 413 IPR029058 -
Lele39g0489 414 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 40 409 - -
Lele39g0489 414 Pfam Lipase (class 3) 170 328 IPR002921 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0489 Lele-ChrLele39 3964960 3966204 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0489 43 414 Acyl Lipid Metabolism Gene Families AT2G44810 63.102 2.17e-165 470
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele39g0489 39 3964960 3966204 Lele39g0489 39 3964960 3966204 ECH
Lele37g0923 37 19119280 19120455 Lele39g0489 39 3964960 3966204 hybridization