Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0923 ATGAAACCCCACAACTTGTCCTTGCCATCATCATCGTTGTCGTTGACAGGGTTCAACCTTGGAAAGAAATGGATGGAGTACCAAGGTTTGAGCGATTGGGACACTTTGCTTGATCCATTGGACGATAATCTACGCTCCGAGATTCTCAGGTACGGCAATTTCGTCCAGGATGCTTATCAATCCTTCAACTTCGATCCTTCTTCACCTTCCTACGCCACCGCATGTTGCTTTCCCAAGAATAAACTCTCCGACCATCGCGGGTTGCCGTGCGCCACAGGTTACAAAGTAACCAAGCACCTACGAGCAACCTCAGGGATCGAGCTACCTTGTTGGGTCGAAAAGGCTCCGAGCGGGGTCGCCACCAGATCCAACAACATCGGCTACGTAGCTGTCTGTGACAACGAACAAGAGATCAAACGGCTCGGACGTCGAGATGTTGTTATTGCATATCGAGGAACAATGACTGGTTTGGAATGGCTGGAAAATTTACGTGCCAATCTCACCCATATGAATCCTGCAAAACGATTTGAAACAGAGCAGGACCACGAAGATCATAATGGAGCAATGGTGCAAAGTGGGTTTCTGAGTCTGTATACATCAGCAGCTTGTGATTCTTTGAGCCTTAAACAAATGGTCCATGAAGAAATTCGTCGGATTCTCCAAACCTACGGTGGTGAAGAAGCCCTCAGCTTCACCCTCACTGGCCACAGTCTAGGGGCGGCGCTGGCGACTCTCACGGCATACGACATCAAAGCAGCCTTCAGGCTTGAGCACCGGACGCCAATGGTCACCGTGATATCGTTCGGTGGGCCCCGCGTGGGCAATGGGAGGTTCAGGCAGGAGCTAGATAAGCAAGGGACGAAGGTTCTGCGAATAGTGAATTCTGACGATGTAGTTACGAAAGTGCCAGGGTTCGTATTTGAAGGAGATGATGATGTGGCGGATGGGAGGGGTATCCACGTGGCAAGTTGGGTCAAAAAGAAGTTGGAGGATGCGCAGTTGACTTATGCGGAGGTGGGAAAAGAGCTTCGGTTGTGTAGCAGGGATTCTCCGTACCTCAGGGGGATGAATGCGGCCACATGTCACGATCTGAACACGTATCTCCACTTGATAGATGGCTTCGTCAGCTCCACATGTCCTTTCAAAGCTACCGCAAAGAGGTTCCTCCGCCAGTGA 1176 0.5068 MKPHNLSLPSSSLSLTGFNLGKKWMEYQGLSDWDTLLDPLDDNLRSEILRYGNFVQDAYQSFNFDPSSPSYATACCFPKNKLSDHRGLPCATGYKVTKHLRATSGIELPCWVEKAPSGVATRSNNIGYVAVCDNEQEIKRLGRRDVVIAYRGTMTGLEWLENLRANLTHMNPAKRFETEQDHEDHNGAMVQSGFLSLYTSAACDSLSLKQMVHEEIRRILQTYGGEEALSFTLTGHSLGAALATLTAYDIKAAFRLEHRTPMVTVISFGGPRVGNGRFRQELDKQGTKVLRIVNSDDVVTKVPGFVFEGDDDVADGRGIHVASWVKKKLEDAQLTYAEVGKELRLCSRDSPYLRGMNAATCHDLNTYLHLIDGFVSSTCPFKATAKRFLRQ 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0923 391 Gene3D alpha/beta hydrolase 23 390 IPR029058 -
Lele37g0923 391 Pfam Lipase (class 3) 147 305 IPR002921 GO:0006629
Lele37g0923 391 SUPERFAMILY alpha/beta-Hydrolases 80 306 IPR029058 -
Lele37g0923 391 CDD Lipase_3 127 312 - -
Lele37g0923 391 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 19 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0923 Lele-ChrLele37 19119280 19120455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0923 20 391 Acyl Lipid Metabolism Gene Families AT2G44810 63.102 2.35e-164 466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0923 37 19119280 19120455 Lele37g0923 37 19119280 19120455 ECH
Lele37g0923 37 19119280 19120455 Lele39g0489 39 3964960 3966204 hybridization