Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0040 ATGGAGAATAGAACGGAGAAAGAGAGCACCGGTCGTCTACCGCTGTCGGAGGTGGTGGCGGATTGTGTTAAGCGGTGGTTTGCGGATACATTGAAGGAGGCTAAAGCAGGGGATATTGACATGCAGATATTGTTGGGTCAGATGTATTACAGCGGTTATGGGGTTCCCAGAGATGCTCAAATGGGAACAATTTGGCTCACCAAAGCCTCAAGAAGGTCTTCAGTTTGGAAAGTCGGTGAGAAGCATCCAGGAATTCAGAATGACCATGTTTCGTTTGATGTATCGTTTCTAGGTTATAATGCAAGTGATTCTGATTCTGATGAGTTGAAGGCCGATTCTTAA 342 0.4561 MENRTEKESTGRLPLSEVVADCVKRWFADTLKEAKAGDIDMQILLGQMYYSGYGVPRDAQMGTIWLTKASRRSSVWKVGEKHPGIQNDHVSFDVSFLGYNASDSDSDELKADS 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0040 113 SUPERFAMILY HCP-like 32 71 - -
Lele39g0040 113 Gene3D Tetratricopeptide repeat domain 20 83 IPR011990 GO:0005515
Lele39g0040 113 SMART sel1 39 74 IPR006597 -
Lele39g0040 113 PANTHER EXPRESSED PROTEIN 1 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0040 Lele-ChrLele39 300978 301844 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g1387 37 22633748 22634611 Lele39g0040 39 300978 301844 hybridization
Lele38g1262 38 23417211 23417970 Lele39g0040 39 300978 301844 hybridization