Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g1262 ATGGAGAACATAACGGAGAAAGAGAGAACCGGTCGTATACCGCTGTCGGAGGTGGTGGCGGATTGTGTTAAGCGGTGGTTTACGGATACATTGAAGGAGGCTAAAGCTGGGGATATCAACATGCAGGTATTGTTGGGTCAGATGTATTACAGCGGTTATGGGGTTCCCAGAGATGCTCAAATGGGAACAATTTGGCTCACCAAAGCCTCAAGAAGTAGGCCTTCAGTTTGGAAAGTTGGCGAGAAGCATCCAGGTATATCCTTCCTTTCCTGTTATTGCAGACAGCTTCATTGTTCTTTTGTCATTTTTGAAAGAATTCAGAATGACCATGTTTCGTTTGATGTATCATTGCTAGGTTATAATCCAAGTGATTCTGATTCGGATGAATTGAAGGCTGATTCTTAA 405 0.4321 MENITEKERTGRIPLSEVVADCVKRWFTDTLKEAKAGDINMQVLLGQMYYSGYGVPRDAQMGTIWLTKASRSRPSVWKVGEKHPGISFLSCYCRQLHCSFVIFERIQNDHVSFDVSLLGYNPSDSDSDELKADS 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g1262 134 SUPERFAMILY HCP-like 32 72 - -
Lele38g1262 134 Gene3D Tetratricopeptide repeat domain 21 81 IPR011990 GO:0005515
Lele38g1262 134 SMART sel1 39 74 IPR006597 -
Lele38g1262 134 PANTHER EXPRESSED PROTEIN 1 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g1262 Lele-ChrLele38 23417211 23417970 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g1262 38 23417211 23417970 Lele39g0040 39 300978 301844 hybridization
Lele38g1262 38 23417211 23417970 Lele40g1205 40 21901275 21902030 hybridization