Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0489 ATGTCGAAAGAAGAAGCTTTCATTGGGTCGATTGATCAGGGAACAACGAGCACAAGATTCATAATCTACGATCGTTCTGCTCGAGCCATCGCATCTCACCAGGTCGAGTTCACTCAGCACTATCCAGAAGCAGGATGGGTGGAGCATGATCCGATGGAGATTTTGGAGAGCGTCCGGGTGTGTATCACCGGAGTTCTCGACAAAGCCAAGTCCGAGGGGATCAATGTCGAAAAGGGATTGAAAGCAATCGGCGTGACCAATCAGAGGGAGACTACTCTACTTTGGAGCAAATCCACTGGGATTCCTCTCTATAACGCTATCGTTTGGATGGATGCTCGTACCAGTTCTGTTTGCAGGAAATTAGAGAATGAGTTATCGGGTGGAAGAACTCATTTTGTGGAGACTTGTGGTCTGCCTATAAGCACTTACTTCAGTGCAACTAAATTGTTATGGCTGATGGAAAACGTGGAAGCGGTGAAGGAGGCTATTAAGAAAGGAGATGCTCTCTTTGGAACTGTAGACACTTGGTTGATATGGAATTTAACCGGCGGCGTGAAGGGCGGATTGCATGTCACTGATGTTTCGAATGCATCACGGACGATGCTGATGAATCTTAAAGCACTTGACTGGGATGCATCCACCTTGAAAACACTTGGAATTCCGGCTGAAATTCTGCCAAAGATTGTAAGTAATTCTGAGATCATCGGAAAGATTACTCCGGGATGGCCAATTTCCGATATCCCAATTGCGGGTTGTTTAGGTGATCAACATGCTGCAATGGTAGGACAAGCGTGCCGAAAAGGAGAGGCTAAAAGCACATATGGTACCGGTGCTTTCATACTCCTAAATACCGGCGAAGAGATAGTTACATCAACACATGGTCTTCTGACAACATTAGCCTTTAAGCTCGGTCCGAATTCCCCGGCCAATTACGCTTTGGAAGGATCAATTGCCATTGCTGGAGCTGCGGTGCAGTGGCTAAGAGATAGCCTTGGTATTATTAGTAGTGCTAAGGAGATAGAGGATTTGGCTTCACAGGTTGAGTCCACAGGTGGGGTTTATTTTGTTCCTGCTTTTAATGGATTGTTTGCGCCATGGTGGCGAGACGATGCTCGCGGGGTTTGTATCGGGATTACGAGGTTTACAAGCAAGGCTCACATTGCTAGAGCTGTGCTTGAGAGCATGTCTTTTCAAGTGAAAGATGTCTTGGATTCAATGAAGAAAGATTCTGAGGATACCGATAAAGATGATAAGAAAGAAAAAGAGGAATTCTTGCTCAGAGTGGATGGTGGTGCAACTGTTAACAACCTTCTTATGCAGATTCAGGCGGACTTGTTGGGAAGTCCGGTGATTAGACCAGCCGACATAGAGACGACAGCTCTCGGGGCGGCCTATGCTGCCGGGTTAGCTGTTGGAGTTTGGACAGAAGAAGAGATATTTGCCTCTGGTGAGAAGGTAAAGACTTCAACTGTTTTCCGTCCAGTATTTGATGAGCAACTGAGGAAGAAGAAAGTGGAATCTTGGTGCAAAGCAGTAACCAGAACGTTTGACTTGGCCGATCTCTCTCTGTGA 1572 0.4637 MSKEEAFIGSIDQGTTSTRFIIYDRSARAIASHQVEFTQHYPEAGWVEHDPMEILESVRVCITGVLDKAKSEGINVEKGLKAIGVTNQRETTLLWSKSTGIPLYNAIVWMDARTSSVCRKLENELSGGRTHFVETCGLPISTYFSATKLLWLMENVEAVKEAIKKGDALFGTVDTWLIWNLTGGVKGGLHVTDVSNASRTMLMNLKALDWDASTLKTLGIPAEILPKIVSNSEIIGKITPGWPISDIPIAGCLGDQHAAMVGQACRKGEAKSTYGTGAFILLNTGEEIVTSTHGLLTTLAFKLGPNSPANYALEGSIAIAGAAVQWLRDSLGIISSAKEIEDLASQVESTGGVYFVPAFNGLFAPWWRDDARGVCIGITRFTSKAHIARAVLESMSFQVKDVLDSMKKDSEDTDKDDKKEKEEFLLRVDGGATVNNLLMQIQADLLGSPVIRPADIETTALGAAYAAGLAVGVWTEEEIFASGEKVKTSTVFRPVFDEQLRKKKVESWCKAVTRTFDLADLSL 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0489 523 ProSitePatterns FGGY family of carbohydrate kinases signature 1. 143 155 IPR018483 GO:0005975|GO:0016773
Lele38g0489 523 SUPERFAMILY Actin-like ATPase domain 265 516 IPR043129 -
Lele38g0489 523 FunFam Glycerol kinase 5 263 - -
Lele38g0489 523 PANTHER SUGAR KINASE 7 517 - -
Lele38g0489 523 Pfam FGGY family of carbohydrate kinases, N-terminal domain 8 262 IPR018484 GO:0005975|GO:0016301
Lele38g0489 523 FunFam Glycerol kinase 264 518 - -
Lele38g0489 523 Gene3D - 264 517 - -
Lele38g0489 523 Gene3D - 2 262 - -
Lele38g0489 523 Pfam FGGY family of carbohydrate kinases, C-terminal domain 270 470 IPR018485 GO:0005975|GO:0016301
Lele38g0489 523 PIRSF GlpK 5 522 IPR000577 GO:0005975|GO:0016301
Lele38g0489 523 SUPERFAMILY Actin-like ATPase domain 8 265 IPR043129 -
Lele38g0489 523 TIGRFAM glycerol_kin: glycerol kinase 7 516 IPR005999 GO:0004370|GO:0006072
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0489 Lele-ChrLele38 3933307 3935897 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0489 38 3933307 3935897 Lele38g0489 38 3933307 3935897 ECH
Lele38g0489 38 3933307 3935897 Lele39g0909 39 18049815 18052633 hybridization
Lele38g0489 38 3933307 3935897 Lele40g0461 40 3792907 3795500 hybridization