Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0487 ATGGCGCCGAGGTCTGGCAGAGGGAAATCGAATAAAGCCAAGGCAGAGAAGAAGAAGGAAGAGAAAGCATCAGTTCCTTCTCTGGTGGACATTAATATCGTCACTCCTTATGATTCTCAAGTTGTCCTCAAGGGCATCTCTACTGATAAGATACTTGATGTGAGAAGGCTATTAGCTGTGACTGTGGAAACCTGCCATTTTACAAACTATTCTCTCTCACACAAGGTTAAAGGGCACAGATTGAATGACAGAGTAGAGGTTGTTACTCTAAAGCCATGTATTATAAAAATGGTTGAAGAGGATTACGTAGAGGAAGCCCTAGCCATTGCCCATGTGAGGCGACTGTTGGACATCGTGGCCTGCACAACCAGGTTTGTGAAGCCTAGACGGGCCTTGACAAGCCCAGACTCCAAAGCTAAGAAAGCTAGCAAGGCCCAAAATAATCAGAAACGGAATTCGAGCCCACCAACTGCGCCCAATGAGGAATTCCGGATCGGGTCGCCGGCGCCTGTCTCGCCGATTTCTGATAATTTTGGCATGGTAGCCATTCATCCATCGCTGAAGCTTTCAGATTTCTACGAGTTCTTCTCTTTCTCTCATCTGTCTCCTCCGATTTTACACTTGAAGAGATGTGAACTGAAGAATGGGGATGATAGACGCAAAGAAGATTACTTTCAGCTTCAGATTAAAATCGGCAACGGGAAGCTAATAGAAGTGGTCGCCTCAGAAAAAGGCTTTTATACCGTGGGGAAGCAGTCTCTTCAGAGCCATTCTTTAGTGGATCTTCTGAAACAGCTCAGCCGAGGTTTTGCTAATGCATATGGATCTTTGATGAAAGCATTTGTGGAACATAATAAGCTTGGTAATCTTCCATATGGATTCCGAGCAAATACATGGCTTGTTCCTCCATTTGTGACGGAGAATACTTCGAACTTTCCTGCCTTACCTACTGAGGACGAAAGCTGGGGTGGTAATGGCGGTGGCCAGGGAAGAAATGGTGAATACAATCTTAGACCATGGGCTACAGACTTTTCAATATTGGCTTCTCTTCCTTGCAAAACTGAAGAGGAGAGGGTGGTCAGAGATAGAAAAGCTTTTCTACTTCACAATCAATTTGTTGATACCTCAATATTTACAGCTGTTTCAGCTATAAGGCATGTCATAGAGTCAAAGTTCAATGGAAATAACAAACTGCATTGTTCTCCGGATTCAATCCTGCAAGAAGGTCGTGTGGGGGACTTGTCTATAGTAGTCAAACGTGATATCCGAGACACAAACCATAAGGATGATAAGAAACTTTCTAGTGGTGAGTCCACAGTGTTTAAGGAGGATTCTCAGAAGAATTTACTCAAAGGATTGACTGCAGATGAAAGTGTAATTGTTCGTGATACTTCTTCCTTGGCTGTCGTTGTCGTACACTACTGTGGATACGTTGCAACAGTAAGTGTGGTGAGTAATATTAACAGAAGGAAGCCTGAATTTCAAGATATTGAAATCGATGATCAGCCAGACGGAGGGGCAAATGCTCTCAATGTCAATAGCTTGAGGCTACTGCTTCACAAGTTTGGAGGTGAGCCATCCAAAGGGAGATCATCAGTAACAAATTTGGATGATTTAGACTCTTCTAGAAATCTTGTTCGGAAGGTGGTTAAAGAAAGCTTGGGAAAGAAAAGTGGGGAGCTAGTTAATTCAGAAAGGTCTATTCGGTGGGAACTTGGTTCTTGTTGGGTACAACATTTGCAAAAGCGGGAAACTTCAACAGATAAAAGTTCTGAAAAAAAGGAAGATGGCAAGGAAGATGTACAAGCTGTCAAAGGTCTTGGAAAGCGATTCAAATTTTTGAAGAGGAGGGAAAAAAAACCAATCAGTTTAGATTGTACAGACCATAGAGAGCAAAATGACTCTAGACCTTGTGATGTGGAAACTGATAAAGCTGAATTAAACAATGATGACTTAAATTGCTCTGCTGAATTGGAGAAGCTTCTTTCAGAAGAAGCATTTTTGCGACTGAAAGAATCTGGAACTGATCTGCATCTAAAGACAGTTGATGGGCTCATCAATATGGCACACAAGTACTATGACGAAACTGCCTTGCCAAAGCTGGTTACAGACTTTGGATCACTTGAACTTTCTCCAGTTGATGGCCGTACACTAACTGATTTCATGCATCTAAGAGGATTAAAGATGCGCTCCCTTGGTGAAGTAGTTAAACTTGCAGAAAATCTTCCACACATACAATCTCTTTGTACTCATGAGATGGTTACTCGATCTTTCAAGCATTTACTCAAAGCCGTAATTGCCTCAGTTGATAATGTAGCAGACTTATCTCCCGCTATTGCATCAACATTGAATTTCTTACTTGGAAGCTGTCCAATGGAAAATACTGACCAAAATTTGACTGAAGACAATCATCTCAGATTGCAGTGGCTACGGGTATATTTAATCAAAAAATTTGGATGGACATTAAATGATGAATTTCAACATTTGAGGAAGCTATCAATCCTGAGAGGGCTTTGTCATAAGTATATAGGATGCTCCTCAGCAGATGGACGTAATTTATTGGAATCATCCAAAATGGCTCTTGATAAAGGAAAGCTTGAGGATGCTGTAAATTACGGAACAAAGGCTTTGGCAAAGATGATGGCTGTTTGTGGTCCCTATCATCGAACTACTGCAAGTGCTTATAGTCTTCTATCTGTGGTTCTCTACCACACTGGAGATTTTAATCAAGCAACCATATATCAACAAAAAGCACTGGATATAAATGAGAGGGAGCTTGGGCTTGACCATCCAGACACAATGAAAAGCTATGGGGATCTCTCTGTCTTCTATTATCGTCTGCAACACATGGAGCTGGCTCTGAAGTATGTCAACCGTGCTCTCTTCCTTCTTCACTTCACATGTGGACTATCTCATCCAAACACAGCAGCAACATATATAAACGTGGCTATGATGGAAGAGGGTATGGGAAATGTTCATGTGGCGCTCAGATATTTGCATGAAGCTCTTAAATGCAACAAAAGATTGTTAGGAGAAGATCATATCCAGACTGCTGCGAGCTTCCATGCCATTGCCATAGCTCTTTCCTTGATGGAAGCATATTCCCTGAGTGTACAACATGAACAAACGACCCTTAAGATACTTCAAGAAAAGCTTGGATCTGAAGATCTTCGTACACAGGATGCTGCTGCATGGCTCGACTATTTTGAATCAAAAGCAATAGAACAACAAGAAGCGGCTAAAAATGGAACTCCAAAGCCTGATGCATCCATTGCAAGTAAAGGTCACCTTAGTGTATCGGATCTCCTGGATTTTATTAATCCTGAACAAGAGCCAAGGGGAAATGACACTCAGAGGAAACAGAGGCGTGCAAAGATACACCCAATAATTGATAAACACCATCAAGAACATGATGATTCAATAGCTGAAGAGAACATTCCCTTAGATGGATCAAAAGATGATAAAAGTATGGAAAAAGGCAACACTCAAGAAACAAAATTCATGCTTTATTCTGAAGAACTGAAAGAAAATGGAGAATTCACTAGATATGTGCCTGAGACAAGTGAAGTTGTTGAGGAAATATCCTCTAATGAAGGGTGGCAAGAAGCCAATTCTAAAGGGCGGTCCGGAAGGAGACCTCTTCTTGCAAAGCTGAGGATTAATAGCTCCGAGAATCACATCGTCAGAGAAAGCAGTTACAGGAATGACATTACATCGCCACATAAAGGAACTCCAAAAGCCACTTCAACCACACTATCTTCACCTGGACAATTAAAAGCCAGAAGCTCCACTTTAAAAGAGGAACATGTTAATCATTCAACAAGAGCTTCAGTGTCCAAAACTTCCTCTACTCCAGCAGCTCTTAGTCCTTTGGCTTCAAAGTCTATATCTTACAAAGAAGTGGCTCTGGCACCACCAGGTACTGTTTTAAAGCCCCTGTTGGAGAAAGCTGAAGGGGACAATGTAAAGACTGAAAGCGACAAGTGCAATGCAGCTGAAGAAAGCTGCCAAAGCTCAGTAGTTGAAGCAGTTTCTGCACAAGAAGATAAAACGGAGGGGACTCGTGAACCTGACATTCAAAGAGAAAATTCTGCTTCAGAACTTGAAGAGGGATCCCTCTCTTCTGATCAGGCAAAACCTGCAGAAACCAATGGTAGTAAGCTTTCAGCTGCAGCGGAACCATTCAACCCGGGAATGTTGTTTATGCCTCACCATTTAAATTCGGTTTCCATCTCTAACATTTATGATACAAATGCAAGTCAAGGCATGCTTGCGGATCCTGTTCTTCCTCCTGTTGCTGCTAGAGTCCCCTGTGGACCAAGATCACCTCTTTACTATAGAACCAACTATACTTTTAGCAAGAAACATGGTTCTTCAAAAAATCACACTCCCATCAGAGAAAGAACTGGATTTGGGGCTCCAAGAATCATGAATCCACATGCAACTGAGTTTGTTCCCAGAAAAGCTTTGCAAACGGAGACCAATGATGCTGATTCCTTTGAAACAAATATGGAAGAAAACAACAATATAGATGAAAAAATCAGCAAGAATTCGAAGAAAAGTTCCTTGAGAAAGCGTGTTTCTGGATCTGAGAAGTCAGAGCTAGCTAGGCAGATATTGCTTAGCTTGCTTGTGAAATCAGTTCAGCAAAATATTGATTCTACTGATGAATCCAAAGTCAATGAAGAAAGAAGCAAGAAAATGGGAAATTCTTCTGATGCAATAGCCAAAGACAATGCTATTATAAGAATTCTATACACGAATGAAGACAAAAATATGATGAATCCCCAATCCAATGGAAGCGAAGAGCAAGAAAACATAGATGCAGCCAATAAAAACAACGGAGATGAAGGGTTTATAGTTGTGACTAAGAAAAGGAGCAGGCAGAAGTTCACAGATGGAGTATCAGTTTTGGGCAATCAGCAATCCATCTGTGCTTCAGTCCGTTGA 4950 0.4149 MAPRSGRGKSNKAKAEKKKEEKASVPSLVDINIVTPYDSQVVLKGISTDKILDVRRLLAVTVETCHFTNYSLSHKVKGHRLNDRVEVVTLKPCIIKMVEEDYVEEALAIAHVRRLLDIVACTTRFVKPRRALTSPDSKAKKASKAQNNQKRNSSPPTAPNEEFRIGSPAPVSPISDNFGMVAIHPSLKLSDFYEFFSFSHLSPPILHLKRCELKNGDDRRKEDYFQLQIKIGNGKLIEVVASEKGFYTVGKQSLQSHSLVDLLKQLSRGFANAYGSLMKAFVEHNKLGNLPYGFRANTWLVPPFVTENTSNFPALPTEDESWGGNGGGQGRNGEYNLRPWATDFSILASLPCKTEEERVVRDRKAFLLHNQFVDTSIFTAVSAIRHVIESKFNGNNKLHCSPDSILQEGRVGDLSIVVKRDIRDTNHKDDKKLSSGESTVFKEDSQKNLLKGLTADESVIVRDTSSLAVVVVHYCGYVATVSVVSNINRRKPEFQDIEIDDQPDGGANALNVNSLRLLLHKFGGEPSKGRSSVTNLDDLDSSRNLVRKVVKESLGKKSGELVNSERSIRWELGSCWVQHLQKRETSTDKSSEKKEDGKEDVQAVKGLGKRFKFLKRREKKPISLDCTDHREQNDSRPCDVETDKAELNNDDLNCSAELEKLLSEEAFLRLKESGTDLHLKTVDGLINMAHKYYDETALPKLVTDFGSLELSPVDGRTLTDFMHLRGLKMRSLGEVVKLAENLPHIQSLCTHEMVTRSFKHLLKAVIASVDNVADLSPAIASTLNFLLGSCPMENTDQNLTEDNHLRLQWLRVYLIKKFGWTLNDEFQHLRKLSILRGLCHKYIGCSSADGRNLLESSKMALDKGKLEDAVNYGTKALAKMMAVCGPYHRTTASAYSLLSVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLSVFYYRLQHMELALKYVNRALFLLHFTCGLSHPNTAATYINVAMMEEGMGNVHVALRYLHEALKCNKRLLGEDHIQTAASFHAIAIALSLMEAYSLSVQHEQTTLKILQEKLGSEDLRTQDAAAWLDYFESKAIEQQEAAKNGTPKPDASIASKGHLSVSDLLDFINPEQEPRGNDTQRKQRRAKIHPIIDKHHQEHDDSIAEENIPLDGSKDDKSMEKGNTQETKFMLYSEELKENGEFTRYVPETSEVVEEISSNEGWQEANSKGRSGRRPLLAKLRINSSENHIVRESSYRNDITSPHKGTPKATSTTLSSPGQLKARSSTLKEEHVNHSTRASVSKTSSTPAALSPLASKSISYKEVALAPPGTVLKPLLEKAEGDNVKTESDKCNAAEESCQSSVVEAVSAQEDKTEGTREPDIQRENSASELEEGSLSSDQAKPAETNGSKLSAAAEPFNPGMLFMPHHLNSVSISNIYDTNASQGMLADPVLPPVAARVPCGPRSPLYYRTNYTFSKKHGSSKNHTPIRERTGFGAPRIMNPHATEFVPRKALQTETNDADSFETNMEENNNIDEKISKNSKKSSLRKRVSGSEKSELARQILLSLLVKSVQQNIDSTDESKVNEERSKKMGNSSDAIAKDNAIIRILYTNEDKNMMNPQSNGSEEQENIDAANKNNGDEGFIVVTKKRSRQKFTDGVSVLGNQQSICASVR 1649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0487 1649 MobiDBLite consensus disorder prediction 131 166 - -
Lele38g0487 1649 Pfam Mitochondrial function, CLU-N-term 48 119 IPR028275 -
Lele38g0487 1649 CDD CLU-central 712 841 IPR033646 -
Lele38g0487 1649 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 10 841 IPR027523 GO:0006996
Lele38g0487 1649 MobiDBLite consensus disorder prediction 1131 1158 - -
Lele38g0487 1649 MobiDBLite consensus disorder prediction 1591 1614 - -
Lele38g0487 1649 MobiDBLite consensus disorder prediction 1341 1389 - -
Lele38g0487 1649 Gene3D Tetratricopeptide repeat domain 850 1095 IPR011990 GO:0005515
Lele38g0487 1649 MobiDBLite consensus disorder prediction 1455 1477 - -
Lele38g0487 1649 ProSiteProfiles Clueless (Clu) domain profile. 318 591 IPR025697 -
Lele38g0487 1649 MobiDBLite consensus disorder prediction 1591 1608 - -
Lele38g0487 1649 MobiDBLite consensus disorder prediction 1366 1384 - -
Lele38g0487 1649 SUPERFAMILY TPR-like 929 1048 IPR011990 GO:0005515
Lele38g0487 1649 Pfam Translation initiation factor eIF3 subunit 135 710 841 IPR033646 -
Lele38g0487 1649 MobiDBLite consensus disorder prediction 1348 1365 - -
Lele38g0487 1649 MobiDBLite consensus disorder prediction 1506 1531 - -
Lele38g0487 1649 Pfam Tetratricopeptide repeat 891 961 - -
Lele38g0487 1649 Pfam Tetratricopeptide repeat 975 1049 - -
Lele38g0487 1649 MobiDBLite consensus disorder prediction 1227 1286 - -
Lele38g0487 1649 SUPERFAMILY TPR-like 858 961 IPR011990 GO:0005515
Lele38g0487 1649 MobiDBLite consensus disorder prediction 1 22 - -
Lele38g0487 1649 MobiDBLite consensus disorder prediction 1551 1571 - -
Lele38g0487 1649 MobiDBLite consensus disorder prediction 1227 1261 - -
Lele38g0487 1649 MobiDBLite consensus disorder prediction 1556 1571 - -
Lele38g0487 1649 ProSiteProfiles TPR repeat profile. 892 925 IPR019734 GO:0005515
Lele38g0487 1649 MobiDBLite consensus disorder prediction 139 160 - -
Lele38g0487 1649 SMART tpr_5 976 1009 IPR019734 GO:0005515
Lele38g0487 1649 SMART tpr_5 934 967 IPR019734 GO:0005515
Lele38g0487 1649 SMART tpr_5 892 925 IPR019734 GO:0005515
Lele38g0487 1649 MobiDBLite consensus disorder prediction 1498 1531 - -
Lele38g0487 1649 FunFam Tetratricopeptide repeat (TPR)-like superfamily protein 847 1097 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0487 Lele-ChrLele38 3902951 3914742 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0487 38 3902951 3914742 Lele38g0487 38 3902951 3914742 ECH
Lele38g0487 38 3902951 3914742 Lele39g0911 39 18064810 18076368 hybridization
Lele38g0487 38 3902951 3914742 Lele40g0459 40 3763415 3775493 hybridization