Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0356 ATGGGCGAATTAGGTAACTACTGCATTAAACTTAATGTTTTACTTCTCTTCCATGGTTTTTGGGTTCTAGGTGGTGCATTTGGTGGCAACAGGGGACTCCGTCCAGTGCCTCCTGAGAAAGGAATATTTCCTTTGGACCACATGCATTTATGTGACGTGGAGAAGAAGGAATATCTCGGTTGTCTAAAATCATTTGGTCACAAGTCTGAAAAATGCAAGGAATTCTCAAAGAAATATCTGGAATGTCGGATGGAAAAGAACTTGATGGCAAAGCAAGACTTGTCAGAGCTTGGTTTCAAGGAAAGTAATGTGGAAACTCCCGGAGGGAAAATTGCTGAGAGTTGA 345 0.4174 MGELGNYCIKLNVLLLFHGFWVLGGAFGGNRGLRPVPPEKGIFPLDHMHLCDVEKKEYLGCLKSFGHKSEKCKEFSKKYLECRMEKNLMAKQDLSELGFKESNVETPGGKIAES 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0356 114 PANTHER CYTOCHROME C OXIDASE 19-1 24 104 - -
Lele38g0356 114 ProSiteProfiles Coiled coil-helix-coiled coil-helix (CHCH) domain profile. 48 90 - -
Lele38g0356 114 Pfam CHCH domain 51 85 IPR010625 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0356 Lele-ChrLele38 2907913 2909498 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0356 38 2907913 2909498 Lele38g0356 38 2907913 2909498 ECH
Lele38g0356 38 2907913 2909498 Lele39g1052 39 19137336 19141149 hybridization
Lele38g0356 38 2907913 2909498 Lele40g0334 40 2757550 2759139 hybridization