Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0533 ATGGTCGACGGTAATAGGGGGGACGGGATTGCCGGCGTCGGTTTTTGGCAAGAAGCTGAGGCATATAGGCATGAGGAGATGGGAGAGAAATTGAGAAAATTAAGGCCGCCTGCAAAAGGAGAGGACTGGTTTTCTCTGAGGGAGTTGAACGATATTTTGGTGAAATTGAGGGAAATGGATGAGAAGGAGTATGAGAAATCACACATTATGAGCTTTGGCATTAAGGATTTGAAAGAGGTCTTGATTAAGGCGCAGGAGTCTAATAAGCAGGAGAGGAAAAGTACAACACTTGATATCTTGGGTGAGCTGGGCCGGACTCCAAGCTTCATGCTGCAGCCTCCTAAGGAGCATCTTGTTGAAAAGTATTTCCATCCAGACAATATGTCTTCATTAGAAAAGATGAAAATCGAGCTTGCGAGAATTAGGGATGAGTTTATAATGTCTGAGTCAGATTGTGGATCATTTCGTGTTCAAGGACATCGAGAGAGTTATATATTCTGCTCAATTCTAACCACTGATTCTGCGTCTAGTGATAAGCATTCTCGGAAAGCCTTGATAGCAATGGTTCAGAAGATGAAAAGGTTACTGAAATACCTCAGAAGAACTGACTGGGATTCCTACTGTTTTATGATTTCAAAGCTAGGTCTACGAGATAATCCAGATACTAAGTACTGA 675 0.4237 MVDGNRGDGIAGVGFWQEAEAYRHEEMGEKLRKLRPPAKGEDWFSLRELNDILVKLREMDEKEYEKSHIMSFGIKDLKEVLIKAQESNKQERKSTTLDILGELGRTPSFMLQPPKEHLVEKYFHPDNMSSLEKMKIELARIRDEFIMSESDCGSFRVQGHRESYIFCSILTTDSASSDKHSRKALIAMVQKMKRLLKYLRRTDWDSYCFMISKLGLRDNPDTKY 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0533 224 Gene3D - 133 220 - -
Lele37g0533 224 PANTHER S15/NS1, RNA-BINDING PROTEIN 19 223 - -
Lele37g0533 224 SUPERFAMILY S15/NS1 RNA-binding domain 136 218 IPR009068 -
Lele37g0533 224 Coils Coil 74 94 - -
Lele37g0533 224 Pfam Ribosomal protein S15 175 217 IPR000589 GO:0003735|GO:0005840|GO:0006412
Lele37g0533 224 SMART Ribosomal_S15_2 138 217 IPR000589 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0533 Lele-ChrLele37 4419306 4421220 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0533 37 4419306 4421220 Lele39g0893 39 17855929 17858523 hybridization
Lele37g0533 37 4419306 4421220 Lele40g0479 40 3996061 3999339 hybridization