Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0520 ATGGGGGGAGCTTGTTCTAGGAAGCAAGATCGGGACAGTGAAGATGGTTCTCATAGAAGACTTTCACGACTATATTGCAAAAGTGGGAGTTTGAAATGGTTGAATTCATCATTTTCTTATCCTTCTATAGATTATCATTCACAGAAAGGAGAATGTCCATCATTGTTGGACTTGTGTGTCCGGAAAATATGCCAGGAGATTCATAAATATAGCACGTTTTCTTCAATACCACGGGACATAAGTCAGCAAATTCTTAATGAATTGGTTTGTTCCCAATGTCTAACTGTTGCTTCCTTCAAAGCTTTTCGAGATTGTTCTCTCCAGGATTTCTACTTGGGAGAATATCCTGGTGTGAATGACAGTTGGATGCAAATTATCTCATCGCAAGGGTCATCTTTACTATCTGTGGATCTTTCTGGGTCTGATGTCACTGATTATGGACTGACCTATCTCAAAGATTGCACAAATCTTTTAAACTTGAATCTTAATCACTGTGACCAGATTTCTGACCATGGTCTGGAGCATATCAATGGTCTGTCAAACTTGACGAGTTTGAGTTTTAGAAGAAACAATACCATTTCTGCACAAGGAATAAGTTCATTTTCTGCTCTTGTTAACTTGGTTAAGTTGGATTTGGAGAGATGTCCCGGGATTCATGGAGGCCTTGTTCATCTTCAAGGTTTAACCAAGCTGGAATCTCTAAATATGAAGTGGTGTAATTGCATAACAGATGCTGACATGAAGCCTTTGTCAGAGCTTACGAACTTGAAGAGTCTAGAGATTTCATGCTGTAAAGTGACAGATTTTGGCGTCACTTTCTTGAAAGGATTACAAAAGCTTGCTCTGTTAAATTTGGAAGGATGCCTTGTTACAGCTGCATGCTTGTATTCTCTAGCAGAGCTTCCTGCCCTGTCAAACTTGAATCTCAATAGATGCAATCTTTCGGATGATGGATGTGAAAAGTTTTCACGAATGAAAAATTTGAAAGTGCTAAACTTGGGATTCAATGAGATAACAGACTCATGTTTAACATACTTAAAAGGATTGACAAAATTAGAGTGCTTGAATCTAGATTCATGTAGGATTGGTGATGAAGGATTGATCAATCTGGCAGGCCTTCAGCAGTTGAAATGCTTGGAATTGTCTGAAACGGAAGTTGGTAGCAGTGGGCTCCACCATATATCAGGATTGTCTAGTCTGGAGAAGATAAACTTGTCATTCACTATGATTAGTGATGTTGGTTTAAGGAAATTGTCTGGACTCTCATCTCTGAAGTCACTTAATTTGGATGCTCGCCAAATTACTGATTCTGGATTAGCAGCCCTTACAAGTTTGACTGGGCTTACTGACCTGGATTTGTTTTGTGCACGAATCACAGATTCTGGAACGAACTATTTGAAAAACTTTAAGAACCTGAGGTCGCTGGAAATATGTGGTGGAGGATTGACTGATGATGGTGTTAAAAATATTGCCCAGCTTTCATCTCTGATGTGCTTAAATTTATCACAGAACTGCAGTCTTACGGACAAATCCCTGCAATTTATTTCTGGGCTCGCGAAGTTGGTCTCTTTGAACGTTTCCAATTCTAATGTCACCAATGTCGGTCTGCAACATCTTAAAACGCTCAAAAACTTGAGATCTCTGACATTGGAGTCATGCAAGGTAACAGCAAATGACATTAGGAAACTTAAAGCAGACCTCCCTAATCTGGTTAACTTTCGGCCAGAATAA 1731 0.3934 MGGACSRKQDRDSEDGSHRRLSRLYCKSGSLKWLNSSFSYPSIDYHSQKGECPSLLDLCVRKICQEIHKYSTFSSIPRDISQQILNELVCSQCLTVASFKAFRDCSLQDFYLGEYPGVNDSWMQIISSQGSSLLSVDLSGSDVTDYGLTYLKDCTNLLNLNLNHCDQISDHGLEHINGLSNLTSLSFRRNNTISAQGISSFSALVNLVKLDLERCPGIHGGLVHLQGLTKLESLNMKWCNCITDADMKPLSELTNLKSLEISCCKVTDFGVTFLKGLQKLALLNLEGCLVTAACLYSLAELPALSNLNLNRCNLSDDGCEKFSRMKNLKVLNLGFNEITDSCLTYLKGLTKLECLNLDSCRIGDEGLINLAGLQQLKCLELSETEVGSSGLHHISGLSSLEKINLSFTMISDVGLRKLSGLSSLKSLNLDARQITDSGLAALTSLTGLTDLDLFCARITDSGTNYLKNFKNLRSLEICGGGLTDDGVKNIAQLSSLMCLNLSQNCSLTDKSLQFISGLAKLVSLNVSNSNVTNVGLQHLKTLKNLRSLTLESCKVTANDIRKLKADLPNLVNFRPE 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0520 576 ProSiteProfiles Leucine-rich repeat profile. 327 347 IPR001611 GO:0005515
Lele37g0520 576 Gene3D Ribonuclease Inhibitor 480 572 IPR032675 -
Lele37g0520 576 Gene3D Ribonuclease Inhibitor 379 479 IPR032675 -
Lele37g0520 576 Gene3D Ribonuclease Inhibitor 220 298 IPR032675 -
Lele37g0520 576 Gene3D Ribonuclease Inhibitor 124 219 IPR032675 -
Lele37g0520 576 PANTHER UNCHARACTERIZED 19 250 - -
Lele37g0520 576 SMART LRR_RI_2 253 279 - -
Lele37g0520 576 SMART LRR_RI_2 397 423 - -
Lele37g0520 576 SMART LRR_RI_2 542 569 - -
Lele37g0520 576 SMART LRR_RI_2 349 375 - -
Lele37g0520 576 SMART LRR_RI_2 301 330 - -
Lele37g0520 576 Pfam Leucine Rich repeat 254 272 IPR001611 GO:0005515
Lele37g0520 576 Pfam Leucine Rich repeat 180 202 IPR001611 GO:0005515
Lele37g0520 576 Pfam Leucine Rich repeat 229 251 IPR001611 GO:0005515
Lele37g0520 576 Pfam Leucine Rich repeat 154 176 IPR001611 GO:0005515
Lele37g0520 576 Pfam Leucine rich repeat 471 529 IPR001611 GO:0005515
Lele37g0520 576 Pfam Leucine rich repeat 302 362 IPR001611 GO:0005515
Lele37g0520 576 SMART LRR_CC_2 154 179 IPR006553 -
Lele37g0520 576 SMART LRR_CC_2 254 283 IPR006553 -
Lele37g0520 576 SMART LRR_CC_2 349 373 IPR006553 -
Lele37g0520 576 SMART LRR_CC_2 421 445 IPR006553 -
Lele37g0520 576 SMART LRR_CC_2 228 253 IPR006553 -
Lele37g0520 576 SMART LRR_CC_2 469 493 IPR006553 -
Lele37g0520 576 SMART LRR_CC_2 518 542 IPR006553 -
Lele37g0520 576 SMART LRR_CC_2 301 325 IPR006553 -
Lele37g0520 576 FunFam F-box/LRR-repeat protein 14 299 382 - -
Lele37g0520 576 FunFam Predicted protein 118 219 - -
Lele37g0520 576 FunFam Leucine-rich repeat family protein 220 298 - -
Lele37g0520 576 SUPERFAMILY RNI-like 27 218 - -
Lele37g0520 576 SUPERFAMILY RNI-like 227 570 - -
Lele37g0520 576 Gene3D Ribonuclease Inhibitor 299 371 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0520 Lele-ChrLele37 4263480 4270586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0520 277 504 Receptor kinase-like Gene Family AT1G75820 27.074 1.23e-10 62.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0520 37 4263480 4270586 Lele37g0520 37 4263480 4270586 ECH
Lele37g0520 37 4263480 4270586 Lele40g0464 40 3825881 3834813 hybridization