Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0327 ATGTCAGGAACTATTGTGGTTTTCGACTTCGACAAGACCATTGTTGACTGCGATAGTGACAATTGGGTCGTCGACGAGCTCGGTTTCACAGACTTGTTCAACCAGCTTCTTCCCACCATGCCTTGGAACTCTCTCATGGATAGGATGATGATGGAGTTTCATTCACAAGGAGTAACCATTGAGGAAATTGAAGAGGTTCTGAAGAGGATTCCTATTCATCCCAGAGTAGTTCCTGCCATTAAAGCAGCTCATGCTTTAGGGTGTGATTTAAGGGTTGTGAGTGATGCAAATATGTTCTTCATTGAGACAATTTTGGAGCATTTGGGAATAAAGGATTGCTTCTCTGAGATTAACACTAATCCTGGCTATGTTAACGAAGAAGGAAGGTTAAGGATTTTGCCTTATCATGACTTTAACAAAGCTCCCCATGGCTGTGGTCTCTGCCCTCCAAACATGTGCAAGGGTCTGATCATAGAGAGGATTCAAGATTCAATATCTCCTGAAGGAAGCAAGAGGTTCATCTATCTTGGTGATGGAGCTGGGGATTACTGTCCAAGCTTGAGGCTGAAAGAGAGAGATTGTGTGATGCCAAGGAAGAACTTTCCTGTGTGGGACTTGATATGCAAAGACCCTTTGCTTGTGAAGGCTGAAATCCATAAATGGAGTGATGGTGAAGATCTTGAGAGGGTTTTGATTCACTTGATCAACAAGATTTCTAAGGAAGAAGAAGAAGAAGCTTCTCAGTTCATCTCACCTGATTGCAAGTTGCAGACTTTGTCTGTGTCTACTGCTCATGAGTCTCTGCCTCGACCTCTCCGAGTTCAGCAGTAA 831 0.4344 MSGTIVVFDFDKTIVDCDSDNWVVDELGFTDLFNQLLPTMPWNSLMDRMMMEFHSQGVTIEEIEEVLKRIPIHPRVVPAIKAAHALGCDLRVVSDANMFFIETILEHLGIKDCFSEINTNPGYVNEEGRLRILPYHDFNKAPHGCGLCPPNMCKGLIIERIQDSISPEGSKRFIYLGDGAGDYCPSLRLKERDCVMPRKNFPVWDLICKDPLLVKAEIHKWSDGEDLERVLIHLINKISKEEEEEASQFISPDCKLQTLSVSTAHESLPRPLRVQQ 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0327 276 SUPERFAMILY HAD-like 4 197 IPR036412 -
Lele37g0327 276 Gene3D - 2 188 IPR023214 -
Lele37g0327 276 PANTHER PHOSPHATASE, ORPHAN 1, 2 2 243 IPR016965 GO:0016791
Lele37g0327 276 TIGRFAM HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 6 187 - -
Lele37g0327 276 TIGRFAM DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 5 199 IPR006384 GO:0016791
Lele37g0327 276 PIRSF PLP_phosphatas_PHOSPHO2 1 239 IPR016965 GO:0016791
Lele37g0327 276 Coils Coil 224 244 - -
Lele37g0327 276 Pfam Putative Phosphatase 5 235 IPR016965 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0327 Lele-ChrLele37 2748385 2749900 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0327 37 2748385 2749900 Lele39g1096 39 19538646 19540582 hybridization
Lele37g0327 37 2748385 2749900 Lele40g0290 40 2343480 2345422 hybridization