Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0314 ATGCAGCTCTGCCAAGTCCAAAGGATAAAGGACAATGCGAGAGATTGCTCATACGCTTCAAGATTTCCTCCACAATTACAAATTTCACTTCCATATTTGCAATGTATATGGGCCAACTATGAGGCAAGCGAGAATTGTTGTTCAACTCAGCTTATTGATGGAGACGGTACATTCAATGTTGCTGGAATTGAACAATTTATGAAGGAGGTGAAATTGGGTGAATTTGGACTTTCATATGCTGTAGTTTCTATAATGGGTCCACAAAGTAGTGGTAAGAGCACTCTATTAAATCATTTGTTCAGAACTAACTTCAGGGAGATGGATGCTTTCAGGGGAAGGTCCCAAACCACTAAAGGAATTTGGATGGCTAGATGTGCTGGCTTGGAGCCTTGTACAATAGTGATGGATTTGGAGGGCACAGATGGAAGAGAACGTGGAGAGGATGATACTGCTTTCGAGAAGCAGAGTGCTCTATTTGCTCTAGCTGTTTCAGATATAGTGCTGATAAACATGTGGTGTCATGACATTGGGCGTGAGCAAGCTGCAAATAAACCTCTTTTGAAAACTGTCTTTCAGGTCATGATGAGATTGTTTAGTCCACGCAAAACGACATTGATGTTTGTCATTCGTGATAAAACGAGGACCCCCCTTGAGAATTTAGAGCCTGTTTTACGAGAGGATATTCAGAAGATTTGGGACTCTGTTCCTAAACCACAGGCTCACAAGGAAACCCAACTAAGTGAATTTTTCAATGTTGAAGTTGTTGCTCTTTCTAGTTATGAAGAAAAGGAAGAGCAATTTAAGGAGCAGGTTGCCAGCTTGAGGCAACGATTCCAGCATTCTATTGCTCCTGGTGGACTTGCTGGGGATAGACGTGGAGTAGTTCCTGCTTCTGGATTTTCTTTCAGTGCACAGCAAATTTGGAGAGTCATTAAGGAGAACAAGGACCTTGACCTACCTGCCCACAAGGTCATGGTTGCTACTGTACGCTGTGAAGAAATTGCCAATGAGAAATATGCTGCTTTTAGTGCAAATGAGGAATGGTGTCAGTTGGAGGAGGCTGTGCAATCTGGCCCAATTACTGGATTTGGGAAAAGGCTCAATTCAATTCTTGATAGTTGTCTTTCAGAGTATGATATAGAAGTAACTTATTTTGATGAAGGTGTCAGATCTGCAAAACAAAAGCAGCTCCAAGAAAAACTGTTGCAACTTGTCCAACCAGCATTCCAATCTGCACTGGGACATGTAAGGTCTGGAACTTTTGATAAATTTAAAGAAGCATTTGACAAGGCTTTGAATGGAGGGGAAGGGTTTTCAGCTGCTGCTGAAAACTGCGTTGAGTCTTGTATGTCTCAGTTTGATGAAGCATGTGCAGAAGTTGTTGTTGAAAAAGCAAGCTGGGATACATCTAAAGTGAGGGAGAAACTGCGTCGTGACATTGATGGTCATGTTGCTTCTGTGCGTGAGGCTAAGCTGTCTGAATTGACATCATCATATCAGGACAAATTGAAGGAGGCCTTAGCTGGACCTGTTGAAGCTCTTTTAGATGAAGCTAACAGTGATACTTGGCCAGCAATAAGAAAACTTCTTAGGCGTGAAACTGAATCAGCAGTTTCAGGTTTCTCTGCTGCAATTTCTGGGTATGATATGGAGGAAAAAACACGACAGAACATGATTACGAGTTTAGAGGACTACGCAAGGGGTGTGGTGGAAGCAAAGGCTAAGGAAGAAGCTGGAAGGGTTCTAATTCGTATGAAGGATAGGTTTACAACATTGTTCAGTCGTGATTCGGATTCAATGCCTCGTATTTGGACGGGGAAGGAAGACATTCGAGCCATTACTAAGACCTCCCGCTCTGCTTCCTTAAAGTTGCTATCTGTTATGGCTGCAACCCGTTTGGATGATCAAGATGTTGATAATATTGAGAAAACATTAGCAGTTGCTCTGGACGATTCATCAGGAACTGCTACTAAGGATAGAAGCATCACGGTGGTTGATCCATTGGCTTCAAGCTCTTGGGAACAGGTTCCTTCCTCAAAAACATTGATCACACCTGTACAGTGCAAATCATTATGGAGGCAATTTAAGATGGAGACAGAGTATCATGTCTCTCAGGCCATATCTGCACAGGAGGCCAACAAGCGTAATAATAACTGGTTGCCTCCTCCATGGGCAATTGTTGCTTTGGTTGTTCTTGGATTTAATGAATTTATGACCCTTCTAAGAAATCCATTGTATTTGGGCGTTATCTTTGTTGGTTTTCTTCTTGTAAAAGCCCTATGGGTGCAGATGGGCATTTCTAATGAATTCAGCAATGGAATGCTACCGGGACTCATATCCTTGTCGACGAGATTTCTTCCAACTGTCATGAACATTATCAGAAAACTAGCAGAGGAGGCACAGAACCCTGCACCTAACAACGCACAGAGAAACCCATCAGGAAGCAATCACAATGCTGTTACAGCTGGAAGCAATATGTCATCTAGCGCTTCCTCTAAAGCAAATTTGTCCCAAAAAGCTTCGTCTAACGTAACTTCATTGGAAAATGGTGCTGAATACTCTAGTTCATCAAAATATGAGTAG 2583 0.4232 MQLCQVQRIKDNARDCSYASRFPPQLQISLPYLQCIWANYEASENCCSTQLIDGDGTFNVAGIEQFMKEVKLGEFGLSYAVVSIMGPQSSGKSTLLNHLFRTNFREMDAFRGRSQTTKGIWMARCAGLEPCTIVMDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLMFVIRDKTRTPLENLEPVLREDIQKIWDSVPKPQAHKETQLSEFFNVEVVALSSYEEKEEQFKEQVASLRQRFQHSIAPGGLAGDRRGVVPASGFSFSAQQIWRVIKENKDLDLPAHKVMVATVRCEEIANEKYAAFSANEEWCQLEEAVQSGPITGFGKRLNSILDSCLSEYDIEVTYFDEGVRSAKQKQLQEKLLQLVQPAFQSALGHVRSGTFDKFKEAFDKALNGGEGFSAAAENCVESCMSQFDEACAEVVVEKASWDTSKVREKLRRDIDGHVASVREAKLSELTSSYQDKLKEALAGPVEALLDEANSDTWPAIRKLLRRETESAVSGFSAAISGYDMEEKTRQNMITSLEDYARGVVEAKAKEEAGRVLIRMKDRFTTLFSRDSDSMPRIWTGKEDIRAITKTSRSASLKLLSVMAATRLDDQDVDNIEKTLAVALDDSSGTATKDRSITVVDPLASSSWEQVPSSKTLITPVQCKSLWRQFKMETEYHVSQAISAQEANKRNNNWLPPPWAIVALVVLGFNEFMTLLRNPLYLGVIFVGFLLVKALWVQMGISNEFSNGMLPGLISLSTRFLPTVMNIIRKLAEEAQNPAPNNAQRNPSGSNHNAVTAGSNMSSSASSKANLSQKASSNVTSLENGAEYSSSSKYE 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0314 860 MobiDBLite consensus disorder prediction 802 860 - -
Lele37g0314 860 Hamap Protein SEY1 [SEY1]. 48 801 IPR008803 -
Lele37g0314 860 FunFam Protein ROOT HAIR DEFECTIVE 3 homolog 57 312 - -
Lele37g0314 860 Pfam Sey1 three-helix bundle domain 362 799 IPR046758 -
Lele37g0314 860 Coils Coil 257 277 - -
Lele37g0314 860 MobiDBLite consensus disorder prediction 801 860 - -
Lele37g0314 860 CDD GBP 76 281 - -
Lele37g0314 860 Gene3D - 53 284 IPR027417 -
Lele37g0314 860 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 50 288 IPR027417 -
Lele37g0314 860 ProSiteProfiles GB1/RHD3-type guanine nucleotide-binding (G) domain profile. 76 291 IPR030386 GO:0005525
Lele37g0314 860 Pfam Root hair defective 3 GTP-binding protein (RHD3) GTPase domain 85 320 - -
Lele37g0314 860 PANTHER PROTEIN SEY1 44 826 IPR008803 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0314 Lele-ChrLele37 2622919 2634034 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0314 37 2622919 2634034 Lele39g1109 39 19642673 19651279 hybridization
Lele37g0314 37 2622919 2634034 Lele40g0280 40 2239740 2249224 hybridization