Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g1188 ATGGGTATGTTTCATGGCCAAAAGTTGCCACATGTTGTGGCACCAACCATTAATCCAAGGGGATTCGCCCCAGTCCCCAGTTCTGGTGTTGCGCAAAGACCTGGGATTGGATCAATTCAGCCTCCCAGTCCCCCTCAGGCGGCTCCTGCACAGCCAGCTCCAGCACCAGCTGCTCCACCTCCAACTGTTCAAACAGCCAATACTTCAAATGTTCCAGTGCACCAAAAGCCCATTGTCACAACCTTGACAAGCCTTTTCAACGAGACACAAGAAGCACTGGGAGGTCCCCATGCAAATCCAGCTAAAAAGCGGGAGATAGAAGACAACTCCAAGAAAATCGGAGGATTATTTGCGAAATTAAACCGTGGGAACATCTCTAAATATGCTGCCAATAAGCTCCTTCAGCTCTGTCAGGCATTAGACAAAGCGCTGCTGACTCCTTCATCCATGTACACAAGATTGCCTTGTATACTTGCACGTGCAGGGTTTTGGTTCTTTTGCTCTATAGGACAATACAATATCTTGCAGTGTCCTCGCTTTCACTGGGCTTATTATCATTCAGGACATGGTTAG 573 0.4799 MGMFHGQKLPHVVAPTINPRGFAPVPSSGVAQRPGIGSIQPPSPPQAAPAQPAPAPAAPPPTVQTANTSNVPVHQKPIVTTLTSLFNETQEALGGPHANPAKKREIEDNSKKIGGLFAKLNRGNISKYAANKLLQLCQALDKALLTPSSMYTRLPCILARAGFWFFCSIGQYNILQCPRFHWAYYHSGHG 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g1188 190 MobiDBLite consensus disorder prediction 38 61 - -
Lele32g1188 190 Gene3D Functional domain of the splicing factor Prp18 67 146 - -
Lele32g1188 190 MobiDBLite consensus disorder prediction 23 73 - -
Lele32g1188 190 PANTHER SEC31-RELATED PROTEIN 4 142 IPR040251 GO:0006888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g1188 Lele-ChrLele32 12254708 12256584 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g1353 29 20181540 20194060 Lele32g1188 32 12254708 12256584 hybridization