Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0988 ATGCAACTGCGGATACTGGCTCTAACTGCAACACCAGGGGCAAAGCAGCAAACAGTCCAGCAAGTCATTGATAATCTGCATATCTCTAAGCTTGAATATCGCAATGAAAATGATCCCGATGTTATCCCATATGTTCACAAAAGGAAGATAGAGTTGATTCAGGTTGCAATGGGTCAAGATGCTGTAGAAATAAACAAGCAGCTTTTGGAAGTAATACGCCCGATTGTAGGTCGGCTCTCAGCAATGGGAGTTCTCAAGAATAGAGATTACCGCACTTTGAGCCCTTGTGAATTACTTGAAATACGGGAAAAGTTTCGTCAAGCACATCCACAAGATCTTTCCAATGTCAACAATGTAGATGTTGAGGGCTATTTTGGAGTTCTTATTAGTCTTTACTACATCCATAAGCTACTTTCAAGTCATGGAATCAGACCAGCGCACGAGATGCTTGAAAGAAAATTGATGCAAGGATTTTTCGCAAAATATATGAGTAAAAATGAAGCCCTTCTGAAAGCAAGGATGTTAATGCAGCAAAACTTATCTCATGGAGCACCAAGTCCCAAGTTGTCCAAAATGCTTGAAATATTGCTGGAACATTTCAAAGCCAATGATCCTCAGAGCTCTAGGGTTATTATTTTCTCAAATTATAGAGAAAGTGTGAGGGATATAATGGATGCAGTAGCAAATATTGGGGAACCAATCAGAGCTACCCAATTTATTGGTCAAAGTTCAGTCCTTGCATATACTTACGTAGTTGACCCACAGAAATTCCGTTCTGGAGCCTACAATGTCATTGTTGCTACATCAATTGGTGAAGAAGGTCTTGATATCATGGAAGTTGATCTTGTTGTAGCTTTTGATGCTAATGTGTCACCATTAAGAATGATTCAGCGCATGGGGAGAACTGGAAGAAAGCACGATGGACAAGTTGATATCCTTTGGTTTCCGAAAATGTTTGTTGGCAATTTGATTCCTTCACTGTTGTTACTAGTTTTAGCTTGTGAAGGGACTGAACTGAAGGGATACTTGCGGAAACAAGCCAAGAGCAAGGCTATAAGTAAACACATGCAAAATGGGGGCACAAATAGCTTCACTTTTCATCCTAGTCCCAGGATGATTCCACACGTCTTTAAACCAGAGGTTCATTTTGTTGAGCTGTCAATTGAGAAATTTGTTTCCCGTGAGAATAAAGTAAAAGGTGACTCTATTCAGCTACATGCGTCCATTGGCGAAATTACAGTTGCGGAGAATAATGTACTTGCGAAGTATTTTCCCACCACTGGTGAAAATACATGGAAGCCATCTCTTATTGCCTTTCCTCACGTCCAGACATATCCTTCTAGAACAGATAAAGTGAATCATTCATGTAGAGCAATAATGCTCATTGATTTGATGCAACGTCTGCAAGGACAAGCATCATTCTTAGAAAATAATAAAACTTCCATTCTTCAGGATGGGCTGTGTATAGAAGCTAGTAATGCATTCGACTTAAACAAGATTGATGACGTTAGATCAGACAACAAATCACACTCAATGCATACAATTGGAAGCAATGCAGTCTCTGTAAGTTGCCTGAGGCTGGATTCCTCTCCTTTAGGGATTCAAACCGAAGACTTTGTTGATCTAACTGCGCTAGATAATATTGTGGGGGAACAGAGATCGCCTAGTACAAGTTACATAAAGAAGGATGATTTACCGTCATCTAGTTTTATTGACTTAGATAAAAATAAAGACAAAACATATGAGTTTGAAGAGACAGTTCCTGACACTCCAGTTGCTGAGACAGTTATGTCAAATGAAAGACATATTGATGGTGGAACGCCTTATCTTGCTCAGTTCAAGACATCTTCGTCGCTAGGTGATGCATTCAATAATGACATCAACGAGTCCCAGTGTAGTCCCTGTTCGACCAGTTTAGTTGAAAGAGGTTTTGTTCCAGAGTCTCCCATTGATGAGAGGGGTGATTTTCTTCCAGGGTTATCAAGAAGCCAGCTTGTCATCCGGGACTGTAAACCACCTGTTCATCTCCAGATGGAACAACAAATTACCTCAAGTCTAAGGGCAAATGAAAATGTCATTATTGATAATGCCACAGATGTAAATAACTTACCTATTGATCCTGCTAATAATGAAACTCAAACCCTTGTATTTGAACGGAAGAGTTGTGCAATCAGAAGAGGTCATGTCTTTAGTTCTCCTACAGTGGAGGAAGACCAAAATCCTTTTGTGGATATTACAAACCGCAGCGTTAGTGAAGAATCACCTTTATGTTGTGGAGATGTTGCTGAAAGTGTCAAGCCAGCACGTAAATTTAAAAGGTTGCGTAAATCTGATGATGGTAGGCGTCATAGGAAAGAGAAAAGGAAGGACCATGTTGTTTCAACAGAAAATAAACATGGCCAAGAAGCTGATGTTTCTAATGATGAAGATGGTGAGGATGACAGTTCATCAGATAGTTTCATAGATGATAGGATGAACCCTACAGCGACCACTCAGCGATCTTTGCTCAGTCAAATACCAGTTGAAGGAGGAACCAACATTTCTGCTGCATTTAGTCCAGACTATGTGTCCTCCATGACTATAATTAGTGAAAATAGGGATTCTTCTGGCAGCATACCAAGACATTTTCAGACACCTCAAATTGACCCAACAAATCAGTCAGCTTCCAAGAGTTTGCAGTCAGTTAAAGTCAACCAAATAACCTCAGAAGTTATGCCTTCAAGTAGTTTCTCTATCGAAACCTCGACACAGATGAGAAGTCAAAAAAGAAAACTGTCATTTCATCGTTTTGGATTTCCAAGTACTAATCTTGAGCGGGAATTTGCACTTCAATCAAACGAAGAATCTATGATGGATGCTTCTGCAACTAAGGATATTCTCTGTGATGATCACATCTTTGATGATATTGATCTTGATGAGTTGGAGGCTCAAGCAGCTTCTCTTCTTAAACAAAAAACAGATTTGTCAGCTCAGAAGCAATATACACATACAATACCTCAATCTCACTTGCACAACCCTCACATTTCCAACCCATCATTCGACCTTGGGATATGA 3054 0.3982 MQLRILALTATPGAKQQTVQQVIDNLHISKLEYRNENDPDVIPYVHKRKIELIQVAMGQDAVEINKQLLEVIRPIVGRLSAMGVLKNRDYRTLSPCELLEIREKFRQAHPQDLSNVNNVDVEGYFGVLISLYYIHKLLSSHGIRPAHEMLERKLMQGFFAKYMSKNEALLKARMLMQQNLSHGAPSPKLSKMLEILLEHFKANDPQSSRVIIFSNYRESVRDIMDAVANIGEPIRATQFIGQSSVLAYTYVVDPQKFRSGAYNVIVATSIGEEGLDIMEVDLVVAFDANVSPLRMIQRMGRTGRKHDGQVDILWFPKMFVGNLIPSLLLLVLACEGTELKGYLRKQAKSKAISKHMQNGGTNSFTFHPSPRMIPHVFKPEVHFVELSIEKFVSRENKVKGDSIQLHASIGEITVAENNVLAKYFPTTGENTWKPSLIAFPHVQTYPSRTDKVNHSCRAIMLIDLMQRLQGQASFLENNKTSILQDGLCIEASNAFDLNKIDDVRSDNKSHSMHTIGSNAVSVSCLRLDSSPLGIQTEDFVDLTALDNIVGEQRSPSTSYIKKDDLPSSSFIDLDKNKDKTYEFEETVPDTPVAETVMSNERHIDGGTPYLAQFKTSSSLGDAFNNDINESQCSPCSTSLVERGFVPESPIDERGDFLPGLSRSQLVIRDCKPPVHLQMEQQITSSLRANENVIIDNATDVNNLPIDPANNETQTLVFERKSCAIRRGHVFSSPTVEEDQNPFVDITNRSVSEESPLCCGDVAESVKPARKFKRLRKSDDGRRHRKEKRKDHVVSTENKHGQEADVSNDEDGEDDSSSDSFIDDRMNPTATTQRSLLSQIPVEGGTNISAAFSPDYVSSMTIISENRDSSGSIPRHFQTPQIDPTNQSASKSLQSVKVNQITSEVMPSSSFSIETSTQMRSQKRKLSFHRFGFPSTNLEREFALQSNEESMMDASATKDILCDDHIFDDIDLDELEAQAASLLKQKTDLSAQKQYTHTIPQSHLHNPHISNPSFDLGI 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0988 1017 CDD FANCM_ID 62 177 - -
Lele32g0988 1017 SMART helicmild6 222 306 IPR001650 -
Lele32g0988 1017 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 188 347 IPR001650 -
Lele32g0988 1017 MobiDBLite consensus disorder prediction 783 805 - -
Lele32g0988 1017 PANTHER FANCONI ANEMIA GROUP M FANCM FAMILY MEMBER 2 993 - -
Lele32g0988 1017 Coils Coil 971 991 - -
Lele32g0988 1017 Gene3D hef helicase domain 59 180 - -
Lele32g0988 1017 Gene3D - 181 318 IPR027417 -
Lele32g0988 1017 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 315 IPR027417 -
Lele32g0988 1017 Gene3D - 1 45 IPR027417 -
Lele32g0988 1017 MobiDBLite consensus disorder prediction 772 826 - -
Lele32g0988 1017 Pfam Helicase conserved C-terminal domain 193 305 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0988 Lele-ChrLele32 6842901 6850911 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g1033 29 7664750 7670027 Lele32g0988 32 6842901 6850911 hybridization
Lele30g0407 30 9088374 9099222 Lele32g0988 32 6842901 6850911 hybridization