Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0453 ATGCAGAATCTGAAAAAATCCAGCAAAATCCAGTCTTTCATTAGCCTCATATTGATCTGCTCTTCTTTTGGGGTCGTTTATCTTCTCGTATCATTGCTAGCTGTTCGTACTTCTAGGGTTGTACATGTGCATTCTTCTTCACAAGATGTGGCTACGCAGACGTCACTTGATCATGTTGTGTTTGGAATTGCTTCAAGCATGAAATCATGGCCTAAGCGAAAGGAGTATGTGAAACTCTGGTGGAAACCCAATCAGATGAGGGGATGTGTGTTTGTGGAAAACCTTTCAGCTGAACAACAGGCTAAAAATAATGCCAGTTCTTCTTCTCTTCCTTCTCTCTGCGTTTCCGAGGATACTTCAAGATTCCGTTACACCTACCGAGGCGGATCCCGGTCGGCAATCCGTGTGGCACGTGTTGTTGCAGAGACTGTTGCTCTGAATCATTCTGATGTAAGATGGTATGTTTTTGGGGATGATGACACAGTTTTCTTTCCAGAGAATTTGTTGAAGATTCTCTCCAAATATGACCACGACCTTTGGTACTACATTGGCGCCCACTCTGAGAGCTACGAGCAGAACCGATTCTTTGGCTTTGGAATGGCTTTTGGTGGAGCAGGTTTTGCCATAAGTTCCTCTCTAGCAAAGGTTTTAGCTAAGGTCTTCGATTCATGCATAGAAAGATATCCTCATCTATATGGAAGTGACAGTAGGGTGTACTCTTGCTTGGCCGAGCTCGGCGTTGGATTAACCCATGAACCTGGTTTTCACCAGGTTGATTTGAACGGAAATATGTTTGGTCTATTGGCTGCACACCCTGTGACACCCTTGTTATCGCTCCATCACATGGATTATACAGATCCTATCTTTCCCAACATGACAAGAACGCAAGCTTTACGACGTTTATTTGAGGCTGCTAATGTGGATTCTCAAAGGATTCTGCAACAAACAGTTTGTTATGACAGGTGGTTTTCATGGACAATCTCAGTGTCATGGGGCTATGCTGTTCAGGTATTCCCAAATCATTTGTTCTTGCCTGAAGCTCTGAGCGTGCAACAAACATTCAGGCAGTGGAAGAAGGGAAATGCTTTTGCAGGAGCATTCACTTTTAACAAAAAAGATCCTCACCCGGATCCGTGTAAACGACCCACCATTTTTTATCTGGATAGTTTATCTTCAGGCGATGATGTGATCATAAGTAATTACACTAAGCATTACAAGAACTGCTCATATGATTCCGCCTCGCCAAGGAAACTGGAAGCGATCAAAGTGGTTACAAATAAGCTAGACCTTAACATAAAACAGGCTCCGAGAAGGCAGTGCTGTGATGTCTTGCCATCTACGGCTCGTGACTCGATGGAACTTGCAATCAGAGAATGCAAAGAGGAAGAATTGATTTACTTGCATTGA 1407 0.435 MQNLKKSSKIQSFISLILICSSFGVVYLLVSLLAVRTSRVVHVHSSSQDVATQTSLDHVVFGIASSMKSWPKRKEYVKLWWKPNQMRGCVFVENLSAEQQAKNNASSSSLPSLCVSEDTSRFRYTYRGGSRSAIRVARVVAETVALNHSDVRWYVFGDDDTVFFPENLLKILSKYDHDLWYYIGAHSESYEQNRFFGFGMAFGGAGFAISSSLAKVLAKVFDSCIERYPHLYGSDSRVYSCLAELGVGLTHEPGFHQVDLNGNMFGLLAAHPVTPLLSLHHMDYTDPIFPNMTRTQALRRLFEAANVDSQRILQQTVCYDRWFSWTISVSWGYAVQVFPNHLFLPEALSVQQTFRQWKKGNAFAGAFTFNKKDPHPDPCKRPTIFYLDSLSSGDDVIISNYTKHYKNCSYDSASPRKLEAIKVVTNKLDLNIKQAPRRQCCDVLPSTARDSMELAIRECKEEELIYLH 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0453 468 Gene3D - 46 312 - -
Lele32g0453 468 Pfam Protein of unknown function, DUF604 192 441 IPR006740 -
Lele32g0453 468 FunFam Fringe-related protein-like 46 306 - -
Lele32g0453 468 PANTHER FRINGE-RELATED 13 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0453 Lele-ChrLele32 2848204 2849788 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0453 10 435 Glycosyltransferase AT1G05280 54.483 6.44e-171 487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0473 29 2880210 2881538 Lele32g0453 32 2848204 2849788 hybridization
Lele30g0930 30 13025408 13027013 Lele32g0453 32 2848204 2849788 hybridization