Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0473 ATGAAGGCATGTGTGTTTGTGGAGAACCTTTCAGCTGAAGAACAGGCTAATAACAATGCCAGTTCTTCTCCTCTTCCTCCTCTCTGGGTTTCCGAGGATACTTCAAGATTCCGTTACACCGACCAAGGTCGATCCCGTTCGGCAATCCGTGTGGCACGTGTTGTTGCAGAGACTGTTGCTCTGAATCATTCCGATATAAGATGGTATGTGTTTGGGGATGATGACACAGTTTTCTTTCCAGAGAATTTGTTGAAGATTCTCTCCAAATATGATCACGAACTATGGTACTATATCAGCACGCACTCAGAGAGCTACGAGCAGAACCGATTCTTTGGCTTTGGAATGGCTTTTGGTGGCGCAGGTTTCGCCATAAGTTCCTCTCTGGCAAAGGTTTTAGCTAAGATTGCAACAGGTGCTAATGTGGATTCTCAGAGGATTCTGCAACAGACAGTTTGTTATGACAGGTGGTTTTCATGCACAATCTCGGTGTCAGGGGGCTATGCTGTTCAGTTGCAGTCTCTGAGAAGGCAGTGCTGTGATGTTTTGACGTCTACGGCTCCTGACTCGATGGAAATTGCAATTAGAGAATGCGAAGAGGACGAATTAATTTACTTGCATTGA 621 0.4541 MKACVFVENLSAEEQANNNASSSPLPPLWVSEDTSRFRYTDQGRSRSAIRVARVVAETVALNHSDIRWYVFGDDDTVFFPENLLKILSKYDHELWYYISTHSESYEQNRFFGFGMAFGGAGFAISSSLAKVLAKIATGANVDSQRILQQTVCYDRWFSCTISVSGGYAVQLQSLRRQCCDVLTSTAPDSMEIAIRECEEDELIYLH 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0473 206 Pfam Protein of unknown function, DUF604 133 173 IPR006740 -
Lele29g0473 206 PANTHER FRINGE-RELATED 137 171 - -
Lele29g0473 206 Gene3D - 8 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0473 Lele-ChrLele29 2880210 2881538 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0473 115 182 Glycosyltransferase AT1G05280 41.176 2.79e-07 48.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0473 29 2880210 2881538 Lele32g0453 32 2848204 2849788 hybridization