Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0352 ATGGCAGTGAGGGCAACCGTCTTGCGTTTCCCGATTGACCCTGATGCCCAGGAGGGCTCGGGTTTACCATGGGGAGTGACGGTGACGCCCTTCGCGGCCAAGGACGAAAACGGTCAAGCTCCGGTGTATGGATCTGATGGACACCTCTTGCCCCGATGCGAGAATTGTTGGGCATACTTCAATACTTACTGCGAGCTCGAACAGTGGGCTTGGAGTTGCTCACTCTGCGGCACCCTCAATGGCCTGTCATCCAAGGCTATCACTCGATACTCTCACCCACAGTCTTGTGCCGAGATGATGTCTTCCTTCATAGATCTTGAATTGCTGGAGGAATCATCAGAGGAAGCAGCAATGCAAGCTCGTCCAGTCTATGTTGCTGCTGTTGACTTGTCCGCTAGAGTTTTTGCCTTCTTGTCTGGTCCTCCTGATTATGGAGCAGGACAATTGGATACAAGAAGATATGGTGAGCAATATGCTAGCAAAGGAGAGGATGCAGACCGTGCCTTACTCCCTGAGCAGACACCGTTCTATAAAGATCTGGCTTCTGTTGCTGTTCAAGCAGGTGTCTGTGTAGACATATTTGCTGTAACAAATGAGTACACAGATTTGGCATCCCTAAAGTTCCTGAGCATTGAAAGTGGGGGTTCTTTATTATTATATACAAGTACTGAGGATTCAACTTTGCCCCAGGACATGTTTCGGATGCTGAGTCAGCCATATGCTTTTGGTTGTGTTCTACGATTAAGAACATCAACTGAATTTAAACCCGGCCATTCTTATGGTCATTTTTTCCCAGATCCACAATATGAAAATGTTCAGCACATCATTTGTTGTGACTCTTATGCCACATATGCCTATGACTTTGAGTTTGAGAACAACGTTGGATTTTCGAGGCATGGATTAGAAGTTCCTACGCTTCAGATTGCGTTTCAGTACACAGTAGTGGTTCCTCCTGAAGAACTTTCCAGTTCAGGAACGGCTTCTACTAGTAGAACCAAGCATTCCCTTAAGCGTCGACTGAGGATTCGGACTTTGCAGTTCAATGCTGCTCAGAACATGCATGAACTTTATGATGGTGTTGATCCTGAAGTTGTGCTATCTTTGCTTGTTCACAAGGTCATATTAGCTTCTTTGAAGGAAGGAGTTCGCGAGGGCAGGGTGTTACTTCAAGATTGGCTAGTGCTCCTTACAGCCCAGTACAATGATGCTTATAAACTTGTTCAGTATGGGAGTGGAAGCTCCATAAGTTCTCAGATTGATGTTTCATTCTCCCAATGTCCACAACTGCAGCCTCTTCCCCGCCTAATTTTTTCTCTCCTTCGTAATCCTCTTCTTCGCTTTCATGAGGAAGGCGTTCATCCAGACTACCGTATCTATCTGCAATGCCTTTTCAGTGCTCTGGAACCAAGTTCCCTTCACCGTGCTGTGTATCCACTGTTGAGTTCATTCTCTACTCCAGATAAACAAGCATATCCACGCCATTCCTTGAGTCGTGCCGCACTAATTACCAGTGGCAGTCCAATATTTTTCCTTGATGCTTTTTCAACTCTGATTGTGTTTTACTCTTCAACTGCAGACCCATCATCTCCTTTCCCTCCTCCCCATGATTGTAAGCCTTCATTACTTATTCTTCTGCCTGGAGTTGAAGTATAA 1653 0.458 MAVRATVLRFPIDPDAQEGSGLPWGVTVTPFAAKDENGQAPVYGSDGHLLPRCENCWAYFNTYCELEQWAWSCSLCGTLNGLSSKAITRYSHPQSCAEMMSSFIDLELLEESSEEAAMQARPVYVAAVDLSARVFAFLSGPPDYGAGQLDTRRYGEQYASKGEDADRALLPEQTPFYKDLASVAVQAGVCVDIFAVTNEYTDLASLKFLSIESGGSLLLYTSTEDSTLPQDMFRMLSQPYAFGCVLRLRTSTEFKPGHSYGHFFPDPQYENVQHIICCDSYATYAYDFEFENNVGFSRHGLEVPTLQIAFQYTVVVPPEELSSSGTASTSRTKHSLKRRLRIRTLQFNAAQNMHELYDGVDPEVVLSLLVHKVILASLKEGVREGRVLLQDWLVLLTAQYNDAYKLVQYGSGSSISSQIDVSFSQCPQLQPLPRLIFSLLRNPLLRFHEEGVHPDYRIYLQCLFSALEPSSLHRAVYPLLSSFSTPDKQAYPRHSLSRAALITSGSPIFFLDAFSTLIVFYSSTADPSSPFPPPHDCKPSLLILLPGVEV 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0352 550 Pfam Sec23/Sec24 helical domain 361 473 IPR006900 GO:0006886|GO:0006888|GO:0030127
Lele32g0352 550 Gene3D von Willebrand factor, type A domain 130 238 IPR036465 -
Lele32g0352 550 Pfam Sec23/Sec24 trunk domain 114 235 IPR006896 GO:0006886|GO:0006888|GO:0030127
Lele32g0352 550 Gene3D - 40 101 - -
Lele32g0352 550 SUPERFAMILY beta-sandwich domain of Sec23/24 3 359 - -
Lele32g0352 550 SUPERFAMILY vWA-like 125 237 IPR036465 -
Lele32g0352 550 Gene3D - 3 111 - -
Lele32g0352 550 PANTHER SEC24-RELATED PROTEIN 3 131 - -
Lele32g0352 550 Gene3D - 239 313 - -
Lele32g0352 550 SUPERFAMILY Zn-finger domain of Sec23/24 41 108 IPR036174 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Lele32g0352 550 SUPERFAMILY Helical domain of Sec23/24 361 477 IPR036175 GO:0006886|GO:0006888|GO:0030127
Lele32g0352 550 Gene3D Sec23/Sec24 helical domain 331 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0352 Lele-ChrLele32 2200726 2206855 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0363 29 2236205 2242012 Lele32g0352 32 2200726 2206855 hybridization
Lele30g1038 30 13736365 13737755 Lele32g0352 32 2200726 2206855 hybridization