Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1038 ATGCATGAACTTTATGATGGTGTTGATCCTGAAGTTGTGCTATCTTTACTTGTTCACAAGGTCATATTAGCTTCTTTGAAGGAAGGAGTTCGCGAGGGCAGGATGTTACTTCAAGATTGGCTAGTGCTCCTTACAGCCCAGTGCAATGATGCTTATAAACTTGTTCAGTATGGGAGTGGAAGCTCCATAAGTTCTCAGATTGATTCATTCTCCCAATGTCCACAACTGCAGCCTCTTCCCCGCCTAATTTTTGCTCTCCTTCGTAATCCTCTTCTTCGCTTTCATGAGGAAGGCGTTCATCCAGACTACCGTATCTATCTGCAATGCCTTTTCAGTGCTCTGGAACCAAGTTCCCTTCACCGTGCTGTGTATCCAGTGTTGAGTTCATTTTCTACTCCAGATAAACAAGCATATCCACGCCATTCCTTGAGTCGTGCCGCACTAATTACCAGTGGCAGTCCAATATTTTTCCTTGATGCGTTCACAACTCTGATTGTGTTTTACTCTTCAACTGCAGATCCATCATTTCCTTTCCCTCCTCCCCATGATTGTAGGCCTTCTTTACTTATTCTTCGCCTGGAGTTGAAGTATAAGTCTACGGTTCTGCCTAATCTTTCATGCAAAATACCTTGTTAG 636 0.4355 MHELYDGVDPEVVLSLLVHKVILASLKEGVREGRMLLQDWLVLLTAQCNDAYKLVQYGSGSSISSQIDSFSQCPQLQPLPRLIFALLRNPLLRFHEEGVHPDYRIYLQCLFSALEPSSLHRAVYPVLSSFSTPDKQAYPRHSLSRAALITSGSPIFFLDAFTTLIVFYSSTADPSFPFPPPHDCRPSLLILRLELKYKSTVLPNLSCKIPC 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1038 211 PANTHER SEC24-RELATED PROTEIN 2 176 - -
Lele30g1038 211 SUPERFAMILY Helical domain of Sec23/24 9 124 IPR036175 GO:0006886|GO:0006888|GO:0030127
Lele30g1038 211 Pfam Sec23/Sec24 helical domain 9 120 IPR006900 GO:0006886|GO:0006888|GO:0030127
Lele30g1038 211 Gene3D Sec23/Sec24 helical domain 1 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1038 Lele-ChrLele30 13736365 13737755 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g1038 30 13736365 13737755 Lele31g1176 31 18245352 18251546 hybridization
Lele30g1038 30 13736365 13737755 Lele32g0352 32 2200726 2206855 hybridization