Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0290 ATGCAGTCGGAGGGGAAGGAATCAGTGTCACACGAGGGTGTTGTTAAGGAAGAAGAAGGAGGAAAAGAGAAACAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGATCATCAGCACTGTACTACGCCGACTGGTTCGGGGAATCGAATACCAGAAATTCAGAATTGCCCTCCTGCTCCAAGAAAGAGAAGACGATCATCGCCGTCGTCTTCTTCGACGTTGACACGGAGATCATTCACAGCTCACGAGTGCTTCTTTGAGGACACGAGGCTTCAAGAGGTAGACTCTTTCTTTCAATACATTTCTGTGAATCGTCAGTTTTCTAAGCTCAAAAACAGAAGCAGAAGTAGTGGGGACCTCTTAAGTCCCAGACCGCTCTTCCCCGCCTGTAGCTCCAGAGAGGCAATTTTGAATTCTCATCCTTTTTGGATAAGTTCAATGGCTCCAAAGCGTGCTGAGAATATCGTGGTCACATCCACCAGAAAAATTGTGCAAGAAAGCACGGTTCAAGTTTCCGTTGTGAAAAGATCAACGAGAGCAAACAAAGACACCGAATCAGAAGAAGCAAACACTTTAACCAGGGACCATGTGAGAACCATTCCTGTCCAAGAAGTGACTCCTCCAAATGCAGGTGACACCACGAAAGACCCTGAACAGAAAAGAGAGCAACCAGTGAAGGAAGGAACTGAAGGGAAAGGTGGTGGTGGAAATAAAGGGACGAAAAGGAAGAGAAAGAAGGCGGAAAAAGGTGGGGGAGAGTACAGGAGGTATGTGTACAGAGTTCTGAAGCAAGTTCACCCAGAGCTGGGGATTTCGTTTCAGGCCATGGCCATTCTGAATAACCTCATGACTGATATGTTCGAGAGGCTTGCAGATGAAGCTACGAGGCTGAAGGCCTACACGGGACACATGACATTGTCTTCCAGGGAGATCCAAGGGGCTGTCAAGCTGGTTCTTCCCGGGGAGCTTGGAAGGCATGCCATTGCTGAAGGTGCCAAAGCCGTCAATAATTATATGTCCAGCGATGCTCGTCCCTAG 1035 0.485 MQSEGKESVSHEGVVKEEEGGKEKQEEEEEEEEEDHQHCTTPTGSGNRIPEIQNCPPAPRKRRRSSPSSSSTLTRRSFTAHECFFEDTRLQEVDSFFQYISVNRQFSKLKNRSRSSGDLLSPRPLFPACSSREAILNSHPFWISSMAPKRAENIVVTSTRKIVQESTVQVSVVKRSTRANKDTESEEANTLTRDHVRTIPVQEVTPPNAGDTTKDPEQKREQPVKEGTEGKGGGGNKGTKRKRKKAEKGGGEYRRYVYRVLKQVHPELGISFQAMAILNNLMTDMFERLADEATRLKAYTGHMTLSSREIQGAVKLVLPGELGRHAIAEGAKAVNNYMSSDARP 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0290 344 PANTHER HISTONE H2B 230 339 IPR000558 GO:0000786|GO:0003677|GO:0030527
Lele32g0290 344 MobiDBLite consensus disorder prediction 213 227 - -
Lele32g0290 344 Coils Coil 15 35 - -
Lele32g0290 344 Pfam Core histone H2A/H2B/H3/H4 230 316 IPR007125 GO:0003677
Lele32g0290 344 SUPERFAMILY Histone-fold 230 340 IPR009072 GO:0046982
Lele32g0290 344 SMART h2b3 240 339 IPR000558 GO:0000786|GO:0003677|GO:0030527
Lele32g0290 344 PRINTS Histone H2B signature 311 324 IPR000558 GO:0000786|GO:0003677|GO:0030527
Lele32g0290 344 PRINTS Histone H2B signature 272 292 IPR000558 GO:0000786|GO:0003677|GO:0030527
Lele32g0290 344 PRINTS Histone H2B signature 324 337 IPR000558 GO:0000786|GO:0003677|GO:0030527
Lele32g0290 344 PRINTS Histone H2B signature 253 271 IPR000558 GO:0000786|GO:0003677|GO:0030527
Lele32g0290 344 PRINTS Histone H2B signature 294 311 IPR000558 GO:0000786|GO:0003677|GO:0030527
Lele32g0290 344 MobiDBLite consensus disorder prediction 177 193 - -
Lele32g0290 344 Gene3D Histone, subunit A 210 341 IPR009072 GO:0046982
Lele32g0290 344 FunFam Histone H2B 213 340 - -
Lele32g0290 344 MobiDBLite consensus disorder prediction 1 74 - -
Lele32g0290 344 MobiDBLite consensus disorder prediction 173 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0290 Lele-ChrLele32 1808368 1811995 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g1103 30 14131892 14132491 Lele32g0290 32 1808368 1811995 hybridization