Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0223 ATGCTCCGTCGGCGACTCGTCCTTTTTCTTTCCCTCACTACGCTTCTTCTCCTGTCCTCCTTCTCTCTGACTTTATGCAAGACCGTCGAAAACGACAACGACGACGAAGATCTCAGCTTTCTCGAAGAAGCTGATGATAGCTCTGCCTCCCACCATGATTACCCAGATCTGGATCATTTCGACGATGGTTCCGTCGGCGAAGATGATTTTGAGGACTTCGCTGGCTTCGACGAGTCGGATGCCGATGCGGAGGGATACAAAGAACCTGATGTGGATGACAAAGATGTTGTTGTATTGAAGGAGAGTAACTTCAGTGACGTTGTGAAGAAGAATCAGTTTGTTATGGTGGAATTTTACGCGCCATGGTGTGGTCACTGCCAGGCTTTGGCTCCAGAGTATGCTGCGGCCGCCACCGAATTGAAGGGCGAGAATGTGATTTTGGCTAAGGTGGATGCCACGGAGGAGAATGAATTAGCCCAGGAGTACGAAATTCAGGGATTCCCCACAGTCTATTTCTTTGTCGATGGGGTTCACAAGTCTTACAATGGCCAGAGGAGCAAAGATGCTATAGTAACCTGGATTAAGAAGAAGATAGGACCTGGTCTTTCCAATATAACTACATTGGATGATGCCGAGCGCATATTGACCTCTGAAAACAAAGTTGTTTTGGGCTTCCTCAACTCTTTAGTGGGTCCTGAGAGTGAGGAGCTAGCTGCTGCATCCCGACTTGAGGATGATGTCAATTTTTATCAAACTGTTAACCCTGATGTGGCAAAGCTTTTCCATATTGACCCAAATGTCAAACGTCCTGCTTTGATCCTGCTCAAGAAAGACTATGAGAAATTGAACCATTTTGATGGCCAATTTGTAAAATCTGCAATAGCAGAATTTGTGTTCTCGAACAAGCTACCTCTGGTCACAATGTTTACAAGAGAAAGTGCCCCATCAGTTTTTGACAACCCAATCAAGAAACAGCTTTTGCTCTTTGTGACTTCAAATGATTCAGAGAAGTTACTCCCAGCATTCCAAGAAGCAGCGAAATTTTTCAAGGGAAAGCTGATCTTTGTACATGTGGAACTGGATAATGAAGATGTTGGGAAGCCAGTTTCTGAATTCTTTGGCATCAGTGGGAATGCTCCCAAAGTACTTGCATACACTGGAAATGATGACGGAAAGAAATTTGTGCTTGATGGAGAAGTGACTGTTGACAAAATTAAGGCATTTGGGGATGATTTCCTTGAAGACAAGCTAAAACCATTCTACAAGTCAGATCCAGTTCCTGAAAATAATGACGGGGATGTGAAAATAGTGGTTGGGGATAACTTTGACGAGACTGTCTTGGATGAGTCTAAGGATGTTCTCCTTGAGATTTATGCACCCTGGTGCGGCCATTGCCAATCTCTGGAACCAACATACAATAAGCTTGCTAAACATCTGCGTGGCATTGAGTCTCTTGTTATAGCCAAGATGGACGGAACAACAAACGAACATCCAAGGGCAAAGACTGATGGATTCCCCACCATTCTCTTCTTCCCAGCTGGAAACAAGAGTTTTGACCCTATTACCGTTGACACAGATCGTACAGTGGTAGCGTTTTATAAGTTCCTGAAGAAGCATGCATCAATCCCATTCAAGCTCCAGAAACCAACCACAAGTGCCAAATCCGCTAGTTCTGATGCCAAGGAGAGTCAGAGTCAGAGTGAGAATAGCAGTAACGATGTGAAGGATGAATTGTGA 1737 0.4456 MLRRRLVLFLSLTTLLLLSSFSLTLCKTVENDNDDEDLSFLEEADDSSASHHDYPDLDHFDDGSVGEDDFEDFAGFDESDADAEGYKEPDVDDKDVVVLKESNFSDVVKKNQFVMVEFYAPWCGHCQALAPEYAAAATELKGENVILAKVDATEENELAQEYEIQGFPTVYFFVDGVHKSYNGQRSKDAIVTWIKKKIGPGLSNITTLDDAERILTSENKVVLGFLNSLVGPESEELAAASRLEDDVNFYQTVNPDVAKLFHIDPNVKRPALILLKKDYEKLNHFDGQFVKSAIAEFVFSNKLPLVTMFTRESAPSVFDNPIKKQLLLFVTSNDSEKLLPAFQEAAKFFKGKLIFVHVELDNEDVGKPVSEFFGISGNAPKVLAYTGNDDGKKFVLDGEVTVDKIKAFGDDFLEDKLKPFYKSDPVPENNDGDVKIVVGDNFDETVLDESKDVLLEIYAPWCGHCQSLEPTYNKLAKHLRGIESLVIAKMDGTTNEHPRAKTDGFPTILFFPAGNKSFDPITVDTDRTVVAFYKFLKKHASIPFKLQKPTTSAKSASSDAKESQSQSENSSNDVKDEL 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0223 578 CDD PDI_b_family 203 301 - -
Lele32g0223 578 MobiDBLite consensus disorder prediction 547 571 - -
Lele32g0223 578 Gene3D Glutaredoxin 299 428 - -
Lele32g0223 578 SUPERFAMILY Thioredoxin-like 301 431 IPR036249 -
Lele32g0223 578 Gene3D Glutaredoxin 84 198 - -
Lele32g0223 578 Gene3D Glutaredoxin 199 298 - -
Lele32g0223 578 FunFam protein disulfide-isomerase A2 198 302 - -
Lele32g0223 578 SUPERFAMILY Thioredoxin-like 89 199 IPR036249 -
Lele32g0223 578 CDD PDI_a_PDI_a'_C 434 536 - -
Lele32g0223 578 ProSiteProfiles Thioredoxin domain profile. 77 199 IPR013766 -
Lele32g0223 578 Pfam Thioredoxin-like domain 237 409 - -
Lele32g0223 578 Gene3D Glutaredoxin 429 542 - -
Lele32g0223 578 FunFam Protein disulfide-isomerase 429 542 - -
Lele32g0223 578 Pfam Thioredoxin 96 196 IPR013766 -
Lele32g0223 578 Pfam Thioredoxin 434 519 IPR013766 -
Lele32g0223 578 SUPERFAMILY Thioredoxin-like 205 313 IPR036249 -
Lele32g0223 578 TIGRFAM ER_PDI_fam: protein disulfide isomerase 94 577 IPR005792 GO:0003756
Lele32g0223 578 FunFam Protein disulfide-isomerase 86 197 - -
Lele32g0223 578 MobiDBLite consensus disorder prediction 547 578 - -
Lele32g0223 578 TIGRFAM pdi_dom: protein disulfide-isomerase domain 99 197 IPR005788 GO:0003756
Lele32g0223 578 FunFam Protein disulfide-isomerase 303 428 - -
Lele32g0223 578 ProSiteProfiles Thioredoxin domain profile. 412 541 IPR013766 -
Lele32g0223 578 ProSitePatterns Thioredoxin family active site. 115 133 IPR017937 -
Lele32g0223 578 PRINTS Thioredoxin family signature 114 122 - -
Lele32g0223 578 PRINTS Thioredoxin family signature 163 174 - -
Lele32g0223 578 PRINTS Thioredoxin family signature 122 131 - -
Lele32g0223 578 PANTHER PROTEIN DISULFIDE ISOMERASE 10 575 - -
Lele32g0223 578 ProSitePatterns Thioredoxin family active site. 454 472 IPR017937 -
Lele32g0223 578 CDD PDI_b'_family 323 413 - -
Lele32g0223 578 SUPERFAMILY Thioredoxin-like 429 541 IPR036249 -
Lele32g0223 578 CDD PDI_a_family 99 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0223 Lele-ChrLele32 1333501 1337102 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g1173 30 14623524 14627295 Lele32g0223 32 1333501 1337102 hybridization