Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0198 ATGTGGAAAGAGCAGCCTAAAGCTGACAGGATTTCATCGGCCACCGCAGATGCAACAGGTGCTGAGGTTGAAGCTGTTACTCGTAGACTGGCTGAAATGCATATTGCTGAAAACAGTGGCCAAAACAGTGTTCTAGCTACTGCCATACAGTTTGATGGCGCTCCCCCTACTAGTCATTTCACTGTACATGGTCCAAACACAGTCTGGAAACCCAAATCCTATGGAACAGTCAGTGGAACCACAGTAGATAAAGTTGAAGTAGAAGTGGCTTCAACTAAAAATAGTATTGCTGCTTTGAGGAGGAATAATCTGTTAGAAAATTTTACGGTGGACAACTCCACATGCTCACTTTCCCGCATAAGAGCTACTTTCTACCCCAAATTTGAAAATGAAAAGTCAGATCAAGAGTCAGATTTTGCACTTATTTTCCTTAGGCAAATGAAAATTTGGGTTACTTCTTCTGGACAGCAGAGAGAACTCCGCAAGATGCTTGACGAATGGGCCGTGTATATAAGAAGGAAATATGGAAATAAACACCTGTCATCGACAATATATCTTGGCGAAGCCGAGCCTTTCCTTGAGCAGTTTGCAAAACGCAGTCCACAAAACCAAGCTCTAGTAGGTTCTGCTGGAAATTTAGTAAGAAGCGAAGACTTTGTGGCCATTGTTGAGGAAGGGCGTGATGAAGAAGGTGATCTTGACGTAGAACGGAAAATACAATCACCAAAGTCTAGTACACTGGTTACGAACTCTGTAGCAAAACAGGAAGGGTTGATTGTGTTTTTGCCTGGAATGCCTGGATGTGCTAAGTCTGCTCTTTGCACAGAGTTGCTAAATTCCTCAGATGTATTTGGGGATAACCGACCAAAGTTGGCTGACGAATGCAGGAAGAAACCTTATTCTGTAATCCTTGCTGACAAGAATGCACCAAATGAAGAATTAGAAGACATGTGTAACAGAGCTAGAGCCCCTGCTGTTCCAGTTGTGCCTGAATCTGAAGGTTGTATTAGCTGCAAATCCTGGACTTGAACTGGCTCAAATCCATATTCCATTGATGCATTGGCTGGTAGTCTTGACAAAGCATCTCCTAATGCTGGCTACGTGCTGCTAATGTTTTATCATCTTTATGAAGTCAAGCTACGGCGTTTCTATGCCTTTCTTAAAATCAGACAGGAATCCTTTCCTCAGCCAGTGCAGTCCATTTTGGAGGAGGGCATAAATCTATATAAGCTTCACACCAAGAGACATGTAGAGTCTACCAAGGGATCCTATGCCAAGGAATGGACCACGTGGGAGAAACAATTACGTGAGATTCTTTCTGGAAATGCTGAGTATCTTAATTCAATTCAGGTTCCGTTTGAGGTTGCCGTCAAGCAAGTCTCAGAACAATTAAGGAACATCGCAAAGGGTGATTACACACCACCAGACGCTGAGAAGAGGAAATTTGGAACCATTGTTTTTGCTGCGCTCGGTCTGGCCGTTACAGAAATTCAAGGTGTCCTTAAGAATATAGCTTCGAACAATCCTTCAGTTGAAGCTTTTCTTAAAGGCAAGCATTTAGAGAATCTGCAGAAAGGCCACGTGACACTTGCCCACAAGAGAAGTCATGGCGTGAAAGCGGCTGCGGATTATGGTGCGTTCTTGCATGAAAAGGTGCCGGTGGAGTTGAAAGCTTTGCTCTTCTCAGACGAAATGGCTGCATTTGAAGAGTGGCCTGGCTCTTTGGAAGGTGAAAAGATTGTGTCCAAAAACGCATGGCCTCATGTCACCTTATGGAGGTTTCAGCCGAAGAAGACAACGCGGAAGGAATTTCTTTTCTTGACAGGAAATTTGACCCAAGAGGATCTTTTAAGTGTTTTAGAGCATCGACTTTGTCTAGCGCTCGTGATCGGACGTTTATCCCCAGACTTCATCTGTGGCGACACCATGAATGGACAGCAAAGCCTCCTTGATTTTACATGCGCGCCACGAACGGGTTTCGTTGAAGAAGAAGATTGGATTATCGAGGAACAAGAGAGAAGAGAAAGATGGTTACCTTCAGAGTCAAGTGACTGGTTCTTGTTGAGACGCTCGAAGCAAGTGATCAAGACTGATGCAGGGGAAATGAAAGTTATGACAAGCTATGGCGGTAGGGTTGTGGACAGGCCTATGCCCATTGGCTTCATCAATATGGAACCGAAGTCCCTGTTCAGTCCTCAGTACCTCGACTCGGGCTTGATCCTTTTCATCCGTAGAGGTATCACGATCTCTGTTTCTCCCATCTATGTTCCTGGGGGTCAGTTTCAGTTCGTTTTAAGGTATCAATTAATTGCAGGGGAGGCAAAGTTGGGATTCATCTACAAAGATAAACTGGCAGAAAGGCGTTTGAAGACTGGGGATCTGTACAGAATCACAGCTGGTTCTGTATTCTACTTGGTGAACACAGGGCGAGCTAAATTCTCAATTTCTCGGGATCTACTTAGTCCTTCTACATCGGAGGAGGAGCCTACCCACCATCAGTTCTTTCTGGGTTCAAGCCTGAAGTCATTAGAGCTGCTTTAA 2541 0.4447 MWKEQPKADRISSATADATGAEVEAVTRRLAEMHIAENSGQNSVLATAIQFDGAPPTSHFTVHGPNTVWKPKSYGTVSGTTVDKVEVEVASTKNSIAALRRNNLLENFTVDNSTCSLSRIRATFYPKFENEKSDQESDFALIFLRQMKIWVTSSGQQRELRKMLDEWAVYIRRKYGNKHLSSTIYLGEAEPFLEQFAKRSPQNQALVGSAGNLVRSEDFVAIVEEGRDEEGDLDVERKIQSPKSSTLVTNSVAKQEGLIVFLPGMPGCAKSALCTELLNSSDVFGDNRPKLADECRKKPYSVILADKNAPNEELEDMCNRARAPAVPVVPESEGCISCKSWTXTGSNPYSIDALAGSLDKASPNAGYVLLMFYHLYEVKLRRFYAFLKIRQESFPQPVQSILEEGINLYKLHTKRHVESTKGSYAKEWTTWEKQLREILSGNAEYLNSIQVPFEVAVKQVSEQLRNIAKGDYTPPDAEKRKFGTIVFAALGLAVTEIQGVLKNIASNNPSVEAFLKGKHLENLQKGHVTLAHKRSHGVKAAADYGAFLHEKVPVELKALLFSDEMAAFEEWPGSLEGEKIVSKNAWPHVTLWRFQPKKTTRKEFLFLTGNLTQEDLLSVLEHRLCLALVIGRLSPDFICGDTMNGQQSLLDFTCAPRTGFVEEEDWIIEEQERRERWLPSESSDWFLLRRSKQVIKTDAGEMKVMTSYGGRVVDRPMPIGFINMEPKSLFSPQYLDSGLILFIRRGITISVSPIYVPGGQFQFVLRYQLIAGEAKLGFIYKDKLAERRLKTGDLYRITAGSVFYLVNTGRAKFSISRDLLSPSTSEEEPTHHQFFLGSSLKSLELL 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0198 846 SUPERFAMILY RmlC-like cupins 666 812 IPR011051 -
Lele32g0198 846 Coils Coil 82 102 - -
Lele32g0198 846 Gene3D Jelly Rolls 681 844 IPR014710 -
Lele32g0198 846 PANTHER TRNA LIGASE 1 142 596 IPR038837 GO:0003972|GO:0006388
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0198 Lele-ChrLele32 1203890 1213048 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0210 29 1222580 1235400 Lele32g0198 32 1203890 1213048 hybridization
Lele30g1197 30 14754908 14762286 Lele32g0198 32 1203890 1213048 hybridization