LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele29g0210	ATGTCAGCGACGCAGAGGATCCTCTGTGCCTTTTCTCATTCTTTCCCTTGTTCATTTCCTCCTATCTGCCCTTCCTCCTCCTTGAAATCTACACCTTTCCTTTTCCATCACTTTTCTCGTCATTACGTTATTCTAGCTCGCTCCGTGCTTATCTCTCCCTCACCAATGCCTCGCAATCAGAGAGATGTTCGGCATAAAGAACCAGAGTGTAAAGAGAAACCTAAAGCTGACAGTATTTCATCGGCCACCGCAGAGGCAACAGGTGCCGCGGCTGAAGCTGTTACTCATAGACTGGCTGAAATGCATATTGCTGAAAACAGTGGCCAAACCAGTGTTCCAGCTGCAGCCATACAGTTTGGAGGCGTCCAACCTGCTAATCAATTCGCTGTACATGGTCCAAAGACAGTCTTGAAACCCAAATCCTATGGAACAGTCAGCGGAACCACAGTAGATAAAGTTGAAGCAGAAGTTGCTTCAACTAAAAATGGTATTTCTGCTTTGAGTAGGAATAATCTGTTAGAAAATTTTACGGTGGACAACTCCACATACTCACTTGCCCGCATAAGAGCTACTTTCTACCCCAAATTTGAAAATGAAAAGTCAGATCAAGAGATCAGGACAAGGATGATTGAGATGGTATCTAAAGGTTTGGCCACCTTAGAGGTCTCACTTAAACACTCTGGTTCCCTTTTTATGTATGCGGGACATAAGGGAGGAGCTTATGCGAAAAATAGTTTTGGAAATTTGTATACTGCTGTTGGTGTATTTGTTCTTGGACGGATGTTTCGTGAGGCTTGGGGCACTGAAGCTTCAAAAAAGCAAGTTGAATTTAATGAGTTTCTTGAGAGAAACCATATGTGCATATCAATGGAACTAGTAACTGCTGTTCTTGGAGACCATGGACAGCGTCCCAAAGATGATTATGTGGTAGTCACGGCAGTCACTGAACTGGGCAAAGGAAAGCCAAAGTTTTATTCGACTCCTGAGATGATTGCTTTCTGCAGAAAATGGCGCCTACCTACAAATCATGTGTGGCTGTTTTCTACAAGGAAATCAGTTTCATCCTTCTTTGCTGCCTTTGATGCCTTATGTGAAGAGGGCACAGCTACACCTGTCTGTAAGGCTCTTGACGAAATTGCGGATACATCCATACCAGGTTCAAAGGATCATGTAATAGCCCAAGGTGAAATCTTGGAGGGTCTTGTTGCTCGTATTGTTGCTCAGGAGAGCTCGAGCCATATGGAAAAAGTTTTAAAAGAATTCCCTCCTGCTGCTGCTGACGGAGTTGGCCTTGATTTTGGACCAAATCTCAGAGAAATTTGTGCTGCAAATAGGTCTGATGAAAAGCAGCAAATAAAAGCCCTTCTCGACAGTGTTGGCAGTTCTTTTTGCCCAGACCACTCAGATTGGTTTGGGCCTGATGGTGCTGATGGTCATTCCAGAAATGCTGATAGATCTGTTCTTTCAAAGTTTTTACAAGCCAATCCTGCAGACTATTCAACTAGGAAATTGCAGGAACTTGTTCGGTTGATGAGAGAAAAGCGCTTCCCTGCTGCATTCAAATGTTACCATAACTTCCACGAAGTAGATGCTATGGCACGTGATAACCTTTTCTACAGAATGGTTATTCATGTACACAGTGATTCTGCTTTTCGACGATACCAAAAGGAGATGAGGCATAAACCCGGATTGTGGCCGCTATATCGAGGTTTTTTTGTTGACATCAATTTATTCAAGGAAAACAAGGAGAGGTCTAGTGAAATCTCCAAGGGCAATGACAATGTGGTTGAAAATGGTACCAGCACATCTGGAAATGACCTTGCAGATGAAGATGCAAACTTGATGGTCAAATTGAAATTTCTTACATATAAGCTGCGAACCTTTTTGATTCGAAATGGTCTGTCTATTCTGTTTAAAGAAGGACCAGGTGCTTACAAGGCTTATTACCTTAGGCAAATGAAAATTTGGGGCACTTCTTCTGGAAAGCAGAGAGAACTCAGCAAGATGCTTGACGAATGGGCTGTGTATATAAGAAGGAAATATGGAAATAAACAGCTCGCATCATCAATATATCTTAGCGAAGCTGAACCTTTCCTTGAGCAGTTTGCAAAACGCAGTCCACAAAACCAAGCTCTAGTAGGTTCTGCTGGTAATTTAGTAAGAAGCGAAGATTTTATGGCCTTTGTTGAGGAAGGGCGTGATGAAGAAGGTGATCTTGAGGTAGAGCGGGAAATACCATCACCAAAGTCTAGTACACTGGCTATGAACACTGTAGCAAAACAGGAAGGGTTGATTGTGTTTTTTCCTGGAATTCCTGGATGTGCTAAGTCTGCTCTTTGCAAAGAGTTGCTAAATTCCTCAGATGTATTTGGGGATAACCGACCAGTTCACAGTCTTATGGGTGATCTGGTTAAAGCAAAGTATTGGCAGAAGGTGGCTGACGAATGCAGGAAGAAACCGTATTCTATAATGCTTGCTGACAAGAATGCACCCAATGAAGAAGTTTGGAGACAATTAGAAGACATGTGTAACAGAACTAGAGCCTCTGCTGTTCCAGTTGTGCCTGAATCTGAAGGAACTGACTCAAATCCATATTCCCTTGATGCATTGGCTGTTTTCATGTTTCGAGTGCTTCAACGAGTCAACCATCCAGGTAGTCTTGACACAGCATCTCCAAATGCTGGCTACGTGCTGCTAATGTTTTATCATCTTTATGAAGGCAAGAGTCGTAGAGAATTTGAGGGCGAATTATTTGAGCGTTTTGGTTCAATTGTCAAGATGCCTTTGTTAGTATCAGATAGGAATCCCCTTCCTCAGCCAGTACAGTCCATTTTGGAGAAGGGCATAAATCTATATAAGCTTCACACCAAGAGACATGGAAGGTTAGAGCCTACCAAGGGATCCTTTGCTAAGGAATGGACCATGTGGGAGAAACAATTACGTGAGATTCTTTTTGGAAATGCGGAGTATCTTAATTCAATTCAGGTTCCGTTTGATGTTGCTGTCAAGCAAGTCTCAGAACAATTAAGGAACATCGCAAAGGGTGATTACACACCACCAGACGCTGAGAAGAGGAAATTTGGAACCATTGTTTTTGCTGCGCTCAGTCTTCCCGATACAGAAATTCAAGGTGTCCTTAAGAATATAGCTTCAAACAATCCTTCAGTTGAAGCTTTTCTGGAAGGCAAGCATTTAGAGAATCTGCAGAAAGCCCACGTGACACTTGCCCACAAGAGAAGTCATGGCGTGAAAGCGGTTGCCGATTATGGCGCGTTCTTGCATGAAAAGGTGCCGGTGGAGTTGACAGCTTTGCTCTTCTCAGACGAAATGGCTGCATTTGAAGCGTGTCCTGGCTCTTTGGAAGGTGAAAAGATTGTCTCCAAAAACGCATGGCCTCATGTCACCTTATGGACTGCTGAAGGGGTTTCAGCCAAAGAAGCCAACGCGTTACCGGAGTTACATCGGGAGGGCAAAGCAAGTCGAGTTGACTTGAATCCTCCCGTCACTATAACTAGCACACTTGAGTTTTTCTAA	3534	0.4329	MSATQRILCAFSHSFPCSFPPICPSSSLKSTPFLFHHFSRHYVILARSVLISPSPMPRNQRDVRHKEPECKEKPKADSISSATAEATGAAAEAVTHRLAEMHIAENSGQTSVPAAAIQFGGVQPANQFAVHGPKTVLKPKSYGTVSGTTVDKVEAEVASTKNGISALSRNNLLENFTVDNSTYSLARIRATFYPKFENEKSDQEIRTRMIEMVSKGLATLEVSLKHSGSLFMYAGHKGGAYAKNSFGNLYTAVGVFVLGRMFREAWGTEASKKQVEFNEFLERNHMCISMELVTAVLGDHGQRPKDDYVVVTAVTELGKGKPKFYSTPEMIAFCRKWRLPTNHVWLFSTRKSVSSFFAAFDALCEEGTATPVCKALDEIADTSIPGSKDHVIAQGEILEGLVARIVAQESSSHMEKVLKEFPPAAADGVGLDFGPNLREICAANRSDEKQQIKALLDSVGSSFCPDHSDWFGPDGADGHSRNADRSVLSKFLQANPADYSTRKLQELVRLMREKRFPAAFKCYHNFHEVDAMARDNLFYRMVIHVHSDSAFRRYQKEMRHKPGLWPLYRGFFVDINLFKENKERSSEISKGNDNVVENGTSTSGNDLADEDANLMVKLKFLTYKLRTFLIRNGLSILFKEGPGAYKAYYLRQMKIWGTSSGKQRELSKMLDEWAVYIRRKYGNKQLASSIYLSEAEPFLEQFAKRSPQNQALVGSAGNLVRSEDFMAFVEEGRDEEGDLEVEREIPSPKSSTLAMNTVAKQEGLIVFFPGIPGCAKSALCKELLNSSDVFGDNRPVHSLMGDLVKAKYWQKVADECRKKPYSIMLADKNAPNEEVWRQLEDMCNRTRASAVPVVPESEGTDSNPYSLDALAVFMFRVLQRVNHPGSLDTASPNAGYVLLMFYHLYEGKSRREFEGELFERFGSIVKMPLLVSDRNPLPQPVQSILEKGINLYKLHTKRHGRLEPTKGSFAKEWTMWEKQLREILFGNAEYLNSIQVPFDVAVKQVSEQLRNIAKGDYTPPDAEKRKFGTIVFAALSLPDTEIQGVLKNIASNNPSVEAFLEGKHLENLQKAHVTLAHKRSHGVKAVADYGAFLHEKVPVELTALLFSDEMAAFEACPGSLEGEKIVSKNAWPHVTLWTAEGVSAKEANALPELHREGKASRVDLNPPVTITSTLEFF	1177

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele29g0210	1177	PANTHER	TRNA LIGASE 1	126	1176	IPR038837	GO:0003972\|GO:0006388
	Lele29g0210	1177	MobiDBLite	consensus disorder prediction	54	86	-	-
	Lele29g0210	1177	MobiDBLite	consensus disorder prediction	59	78	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele29g0210	Lele-ChrLele29	1222580	1235400	Dispersed/Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lele29g0210	29	1222580	1235400	Lele31g1340	31	19334668	19348285	hybridization
	Lele29g0210	29	1222580	1235400	Lele32g0198	32	1203890	1213048	hybridization