Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0143 ATGGCGTGCAAGAGTGGGTGCGAGGCTTTTAGGACGGACGAGCTGTGCTGCAGGAACCACTACAACAGTCCACAAATGTGTAAGCCTTCGATTTATTCAGAGTTCTTCAAGCATGCTTGCCCGGCGACCTTCACTTACGCTCATGACAACCCTTCACTAATACACGAGTGTTCTTCCCCAAGAGAGCTCAAGTTGCTTTTTAGAGTTCCTTGTGGTCCTGTTAGTCCTGTTACTGTGTTGCATTGCTGGCGTTTGTTTTGTGATCAGCTTAACCCTGGAGCCTGA 285 0.4877 MACKSGCEAFRTDELCCRNHYNSPQMCKPSIYSEFFKHACPATFTYAHDNPSLIHECSSPRELKLLFRVPCGPVSPVTVLHCWRLFCDQLNPGA 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0143 94 Pfam Thaumatin family 1 67 IPR001938 -
Lele32g0143 94 PANTHER OS03G0233200 PROTEIN 2 64 IPR001938 -
Lele32g0143 94 SMART tha2 1 72 IPR001938 -
Lele32g0143 94 Gene3D Thaumatin 1 70 IPR037176 -
Lele32g0143 94 SUPERFAMILY Osmotin, thaumatin-like protein 2 67 IPR037176 -
Lele32g0143 94 ProSiteProfiles Thaumatin family profile. 1 67 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0143 Lele-ChrLele32 818208 818663 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0143 1 59 Receptor kinase-like Gene Family AT5G38280 38.983 3.65e-11 55.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0153 29 845156 846231 Lele32g0143 32 818208 818663 hybridization