Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1520 ATGTACACCCCTGCTACGATCACGATCATCCCTTCTCACACCATAAAGCTCCAACATGATGAAGCTGAGCATTGTACTGGCGTTTCGGTCACATGCAGATTTTTGCTACATAGAAGAGATAGGCGGTGCATCTCAGGATTACTTTGCCGAAACCGTCACATCGTACCCGTTCAGCTGTCGTGGAACTTCAACTATGGACCCGCCGGAGAGAGCAACGGGTTCGATGGGCTGAACGCGCCGGAGACGGAGGCGAATGATGCGGTGGTGGCCTTCAAGACGGCTCTCTGGTACTGGATGCAACACGTGCGGCCCGTCCTCGGCCAAGGTTTCGGCGCCACCAATGGGCGCCTCGAATGTGACGGCGCTAACCCCAGCACTGTTCAGGCTCGGGTTAATTACTATACCCAATACTGTTCTCAGCTGGGTGTTACTTTTGGCGATAATCTCACTTGCTAG 456 0.5395 MYTPATITIIPSHTIKLQHDEAEHCTGVSVTCRFLLHRRDRRCISGLLCRNRHIVPVQLSWNFNYGPAGESNGFDGLNAPETEANDAVVAFKTALWYWMQHVRPVLGQGFGATNGRLECDGANPSTVQARVNYYTQYCSQLGVTFGDNLTC 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1520 151 Gene3D - 86 151 - -
Lele31g1520 151 SUPERFAMILY Lysozyme-like 56 151 IPR023346 -
Lele31g1520 151 ProSitePatterns Chitinases family 19 signature 2. 89 99 IPR000726 GO:0004568|GO:0006032|GO:0016998
Lele31g1520 151 PANTHER CHITINASE-RELATED 56 151 - -
Lele31g1520 151 Pfam Chitinase class I 113 151 IPR000726 GO:0004568|GO:0006032|GO:0016998
Lele31g1520 151 Pfam Chitinase class I 56 101 IPR000726 GO:0004568|GO:0006032|GO:0016998
Lele31g1520 151 Gene3D Endochitinase, domain 2 56 85 - -
Lele31g1520 151 CDD chitinase_GH19 56 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1520 Lele-ChrLele31 20392316 20392986 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1520 56 151 Glycoside Hydrolase AT3G54420 72.000 9.49e-47 151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g1371 30 15863233 15863996 Lele31g1520 31 20392316 20392986 hybridization