Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1501 ATGAGCGCGCTTTGGAGTCTTGGGGTAGGGGAGCAGCTGGGGCACTTGGGCTTGGGTGTTGAGTACTATTTACAGTACACACTTGTCATGGTTGTATTATCGGGATTGCTAGTTCTGGGCATGTACCACTTATTAATCCAAAGATTTAAGCTGGAGCACTTTCGTAGAGTGACAGCTGTTGGGTATTCCTGTGTTGTTTTCGGGTGGATGACAATCCTTTCAGTGAAGCAACCTTCTTCCAAGCTGGATCTATTTGGTTTTCTTTCACTTCCCATCAGTTTTGCACCTTTTGAATCACTTGTTTTCACTTCAGTCATTGTTCCCCAAGCGAGTTTCCTTGGCCATTTATCAGGAATTATTGTTGGATATGCTATTGTTTGGGGTTTGATTCATGGGATGAACAATTACTGGGCCCTTTCCTTATTAGGCTGGATTTTGCTTGTCTTTGTTTTGAGTTTGAAGAAATCTGGTGCAATTGACCTCAACTTTCTTGAGATTGAATCTGTCACAGATCCATCATTACCATCCGTACGATTTTTGGGATCAGGGAATGGCAGAGCACTGCAGATGAGTGTGTTACCATTAGGAAATGTTGAACTCGTCTAA 606 0.4274 MSALWSLGVGEQLGHLGLGVEYYLQYTLVMVVLSGLLVLGMYHLLIQRFKLEHFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLVFTSVIVPQASFLGHLSGIIVGYAIVWGLIHGMNNYWALSLLGWILLVFVLSLKKSGAIDLNFLEIESVTDPSLPSVRFLGSGNGRALQMSVLPLGNVELV 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1501 201 Gene3D - 1 128 IPR035952 -
Lele31g1501 201 SUPERFAMILY Rhomboid-like 18 129 IPR035952 -
Lele31g1501 201 Pfam Rhomboid family 19 131 IPR022764 GO:0004252|GO:0016020
Lele31g1501 201 PANTHER RHOMBOID PROTEASE 1 144 - -
Lele31g1501 201 FunFam RHOMBOID-like protein 13 1 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1501 Lele-ChrLele31 20276469 20277074 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0044 29 272190 273005 Lele31g1501 31 20276469 20277074 hybridization
Lele30g1347 30 15718598 15719413 Lele31g1501 31 20276469 20277074 hybridization