Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0044 ATGGGGAAGCCTTTGTTTTATGAGATCTTAGAAAAACCCGCCACAAGTTGCATCATAGGAATATGCTGCGCGATCTGGTTCTACATACAGAAGAAAAATATCGGCTATTCTCACGTGGGACTTAGTTATGAGACTGCCATGGAAGGGCATTATTGGAGGATAATTACTTCGGCATTTTCCCATATAAGTGTTCTTCATCTTGTTTTTAACATGAGCGCGCTTTGGAGTCTTGGGGTAGTGGAGCAGCTGGGGCACTTGGGCCTGGGTGTTGAGTACTATTTACAGTACACACTTGTCATGGTTGTATTATCGGGATTGCTAGTTCTGGGCATTTACCACTTATTAATCCAAAGATTTAAGCTGGAGCACTTTCGTAGAGTGACAGCTGTTGGGTATTCCTGTGTTGTTTTCGGGTGGATGACACTCCTTTCAGTGAAGCAACCTTCTTCCAAGCTGGATCTATTTGGTTTTCTTTCACTTCCAATCAGTTTTGCACCGTTTGAATCACTTGTTTTCACTTCAATCATTGTTCCCCAAGCGAGTTTCCTTGGCCATTTATCAGGAATTATTGTTGGATATGCTATTGCTTGGGGTTTGATTCATGGGATGAACAATTACTGGGCGCTTTCCTTATTAGGCTGGATTTTGCTTGTCTTTGTTTTGAGTTTGAAGAAATCTGGTGCAATTGACCTCAACTTTCTTGAGATTGAATCTGTCACAGATCCATCATTACCATCCGTACGATTTTTGGGATCAGGGAATGGCAGAACACTGCAGATGAGTGCGTTACCATTAGGAAATGTCGAACTCGTCTAA 816 0.4216 MGKPLFYEILEKPATSCIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHYWRIITSAFSHISVLHLVFNMSALWSLGVVEQLGHLGLGVEYYLQYTLVMVVLSGLLVLGIYHLLIQRFKLEHFRRVTAVGYSCVVFGWMTLLSVKQPSSKLDLFGFLSLPISFAPFESLVFTSIIVPQASFLGHLSGIIVGYAIAWGLIHGMNNYWALSLLGWILLVFVLSLKKSGAIDLNFLEIESVTDPSLPSVRFLGSGNGRTLQMSALPLGNVELV 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0044 271 Pfam Rhomboid family 48 201 IPR022764 GO:0004252|GO:0016020
Lele29g0044 271 SUPERFAMILY Rhomboid-like 13 201 IPR035952 -
Lele29g0044 271 PANTHER RHOMBOID PROTEASE 13 211 - -
Lele29g0044 271 FunFam RHOMBOID-like protein 13 9 201 - -
Lele29g0044 271 Gene3D - 10 201 IPR035952 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0044 Lele-ChrLele29 272190 273005 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0044 29 272190 273005 Lele31g1501 31 20276469 20277074 hybridization
Lele29g0044 29 272190 273005 Lele32g0044 32 286226 287041 hybridization