Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1496 ATGGCATCGAACAACGGCGTTCCCTCCACCGGCAAGGGTCTCATCCTCAGCTTCGGTGAGATGCTTATTGATTTCGTTCCCACCGTCTCCGGCGTCTCCTTGGCCGAGGCTCCCGGCTTCCTCAAAGCCCCTGGCGGCGCTCCTGCCAACGTCGCCATCGCCGTATCCAGGATCGGTGGCCAAGCTGCCTTCGTCGGCAAGCTCGGTGACGACGAGTTCGGTCACATGCTCGCCGGGATCTTGAATCAAAACGGGGTCAGATCTGATGGCATCACCTTCGACCAGGGCGCTCGTACTGCCTTGGCCTTCGTCACCCTGCGCGCTGACGGCGAGCGCGAGTTCATGTTCTACAGAAATCCGAGCGCCGATATGCTCCTCAAGCCAGAAGAGCTAAATCTTGAACTCATCAGATCGGCAAAAGTATTCCATTATGGATCGATAAGCTTGATCGTGGAGCCGTGCAGATCGGCGCACCTGAGGGCAATGGAAGTTGCCAAGGAAGCTGGGTGCCTGCTCTCTTATGATCCAAACCTGAGGCTGCCTTTATGGCCTTCGGCTGAGGAGGCCCGTAAGCAAATATTGAGCATTTGGGATAAGGCAGATATAATCAAGGTGAGTGATGTGGAGCTGGAGTTCCTCACTGGGAGTGACAAAATTGATGATGCTTCAGCCATGTCGTTGTGGCACCCCAAGTTGAAGTTGCTGCTCGTGACTCTTGGTGAGCGTGGTTCCAGATACTACACCAAGAATTTCCGTGGATCAGTGGACGCTTTTCATGTCAACACAGTCGATACAACTGGCGCTGGTGATTCTTTTGTTGGCGCCCTCTTGTGCAAGATTGTCGATGATCAATCCGTGCTTGAAGATGAAGCAAGGTTGAGAGAAGTACTCAAGTATGCAAATGCATGTGGAGCAATCACAACCACTAAAAAGGGAGCAATCCCCGCCCTTCCCTCCGAGGCTGATGTGCTCGACCTCATCAATGGCGACTAG 993 0.5378 MASNNGVPSTGKGLILSFGEMLIDFVPTVSGVSLAEAPGFLKAPGGAPANVAIAVSRIGGQAAFVGKLGDDEFGHMLAGILNQNGVRSDGITFDQGARTALAFVTLRADGEREFMFYRNPSADMLLKPEELNLELIRSAKVFHYGSISLIVEPCRSAHLRAMEVAKEAGCLLSYDPNLRLPLWPSAEEARKQILSIWDKADIIKVSDVELEFLTGSDKIDDASAMSLWHPKLKLLLVTLGERGSRYYTKNFRGSVDAFHVNTVDTTGAGDSFVGALLCKIVDDQSVLEDEARLREVLKYANACGAITTTKKGAIPALPSEADVLDLINGD 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1496 330 Gene3D - 12 330 IPR029056 -
Lele31g1496 330 FunFam Probable fructokinase-2 12 330 - -
Lele31g1496 330 CDD bac_FRK 14 314 - -
Lele31g1496 330 Pfam pfkB family carbohydrate kinase 14 319 IPR011611 -
Lele31g1496 330 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 264 277 IPR002173 GO:0016773
Lele31g1496 330 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 45 69 IPR002173 GO:0016773
Lele31g1496 330 PRINTS Ribokinase signature 195 210 IPR002139 GO:0016301
Lele31g1496 330 PRINTS Ribokinase signature 235 246 IPR002139 GO:0016301
Lele31g1496 330 PRINTS Ribokinase signature 40 59 IPR002139 GO:0016301
Lele31g1496 330 SUPERFAMILY Ribokinase-like 15 326 IPR029056 -
Lele31g1496 330 PANTHER HEXOKINASE FAMILY MEMBER 14 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1496 Lele-ChrLele31 20255718 20259853 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0048 29 291660 295200 Lele31g1496 31 20255718 20259853 hybridization
Lele30g1342 30 15699434 15702376 Lele31g1496 31 20255718 20259853 hybridization