Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1342 ATGGCATCCCACAACGGCGTTCCCTCTACCGGTGAGGGCCTCATCCTCAGCTTCGGTGAGATGCTCATTGATTTCGTTCCCACCGTCTCCGGCGTCTCCTTGGCCGAGGCTCCCGGATTCCTCAAAGCCCCCGGTGGCGCTCCTGCCAACGTTGCCATCGCCGTGTCCAGGCTCGGTGGCCAAGCCGCCTTCGTCGGCAAGCTCGGTGACGACGAGTTCGGTCACATGCTTGCCGGGATCTTGAAGCAAAACGGCGTCCGATCTGATGGCATCACCTTCGACCAGGGCGCTCGTACTGCCTTGGCCTTCGTCACCCTGCGCGCCGACGGCGAGCGCGAGTTCATGTTCTACAGAAATCCGAGCGCTGATATGCTCCTCAAGCCTGAAGAGCTCAATCTTGAACTCATCAGATCGGCAAAAGTATTCCATTATGGATCCATAAGCTTGATCGTGGAGCCGTGCAGATCTGCACACCTAAGGGCAATGGAAGTTGCCAAGGAAGCTGGGTGCCTGCTCTCTTATGATCCAAACCTGAGGCTGCCTTTATGGCCTTCGGCTGAGGAGGCCCGTAAGCAAATATTGAGCATATGGGACAAGGCAGATATAATCAAGGTGAGTGATGTGGAGCTGGAGTTCCTCACTGGGAGTGACAAAATTGATGACGCTTCAGCCATGTCATTGTGGCACCCCAATTTGACGTTGCTGCTCGTGACTCTTGGTGAGCATGGTTCCAGATACTACACCAAGAATTTCCATGGATCAGTGGACGCTTTTCATGTCAACACAGTCGATACAACTGGCGCTGGTGATTCTTTTGTTGGCGCCCTCTTGTGCAAGATTGTCGATGATCAATCCGTACTTGAAGATGAATCAAGGTTGAGAGAAGTACTCAAGTATGCAAATGCATGCGGAGCAATCACAACCACCAAGAAGGGAGCAATCCCCGCCCTTCCCACAGAGGCTGATGTGCTCAAGCTAATCAATGGGGCCTAG 993 0.5378 MASHNGVPSTGEGLILSFGEMLIDFVPTVSGVSLAEAPGFLKAPGGAPANVAIAVSRLGGQAAFVGKLGDDEFGHMLAGILKQNGVRSDGITFDQGARTALAFVTLRADGEREFMFYRNPSADMLLKPEELNLELIRSAKVFHYGSISLIVEPCRSAHLRAMEVAKEAGCLLSYDPNLRLPLWPSAEEARKQILSIWDKADIIKVSDVELEFLTGSDKIDDASAMSLWHPNLTLLLVTLGEHGSRYYTKNFHGSVDAFHVNTVDTTGAGDSFVGALLCKIVDDQSVLEDESRLREVLKYANACGAITTTKKGAIPALPTEADVLKLINGA 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1342 330 CDD bac_FRK 14 314 - -
Lele30g1342 330 FunFam Probable fructokinase-2 12 330 - -
Lele30g1342 330 PRINTS Ribokinase signature 195 210 IPR002139 GO:0016301
Lele30g1342 330 PRINTS Ribokinase signature 235 246 IPR002139 GO:0016301
Lele30g1342 330 PRINTS Ribokinase signature 40 59 IPR002139 GO:0016301
Lele30g1342 330 Pfam pfkB family carbohydrate kinase 14 319 IPR011611 -
Lele30g1342 330 PANTHER HEXOKINASE FAMILY MEMBER 14 325 - -
Lele30g1342 330 Gene3D - 13 330 IPR029056 -
Lele30g1342 330 SUPERFAMILY Ribokinase-like 15 326 IPR029056 -
Lele30g1342 330 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 264 277 IPR002173 GO:0016773
Lele30g1342 330 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 45 69 IPR002173 GO:0016773
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1342 Lele-ChrLele30 15699434 15702376 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g1342 30 15699434 15702376 Lele31g1496 31 20255718 20259853 hybridization
Lele30g1342 30 15699434 15702376 Lele32g0050 32 303383 306525 hybridization