Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1487 ATGACAGTAGCGGCAGGAATCGGGTACGCTCTACTAGCATTAGGCCCGTCTCTCTCCCTCTTCGTCTCTGTAATTTCCAGAAAGCCGTTCTTGATCCTAACCGTTCTCTCCAGTACGTTGTTGTGGCTTATAAGTTTGATTGTGCTGTCTGGAGTATGGAGGGGTTTCCTTCCTCTGAAAACCACGACATGGTGGCCTTTTGGAATACTTATATTGACGTCCGTTGCTTTCCAAGAAGGGCTTCGTGTTTTATTCTGGAAAGTCTACAGGAGGCTGGAGGATATTTTAGATGCTTTTGCTGACAGAGTATCAAGACCACATCTTTCACTGACAGATAAGATGCAAATTGCTCTGGCAGGTGGTTTGGGTCATGGTGTGGCACATGCTGTGTTCTTCTGCCTCAGCCTGTTGACTCCTGCATTTGGTCCAGCTACATATTTTTCTGACAGATGCTCACAGATACCGTTTTTCCTTCTTTCTTCAATTATCGCTCTGGCATTTGTCACAATTCACACTTTCTCAATGGTCATCGCATTTAATGGATACGCGGAGGTGAACAAACTGGACCAATATTCTGTTCCCATTGTCCACCTTGTTACAGGGATGGTGACTCTCATAAACTTGGCACCTGGGGGCTGCACTGTTGGAATTCCTCTTCTATATGTCATTGCAATGCTGACCTTATTCAACTGCGGAGGAATAGTATGGAGAAGGCTGACAGAAAACCAGAGCAGATAG 738 0.4553 MTVAAGIGYALLALGPSLSLFVSVISRKPFLILTVLSSTLLWLISLIVLSGVWRGFLPLKTTTWWPFGILILTSVAFQEGLRVLFWKVYRRLEDILDAFADRVSRPHLSLTDKMQIALAGGLGHGVAHAVFFCLSLLTPAFGPATYFSDRCSQIPFFLLSSIIALAFVTIHTFSMVIAFNGYAEVNKLDQYSVPIVHLVTGMVTLINLAPGGCTVGIPLLYVIAMLTLFNCGGIVWRRLTENQSR 245
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1487 245 Pfam Aph-1 protein 2 236 IPR009294 GO:0016020|GO:0016485|GO:0043085
Lele31g1487 245 PANTHER GAMMA-SECRETASE SUBUNIT APH-1 1 244 IPR009294 GO:0016020|GO:0016485|GO:0043085
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele31g1487 Lele-ChrLele31 20206478 20208966 Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0058 29 340507 342551 Lele31g1487 31 20206478 20208966 hybridization
Lele30g1333 30 15639053 15647201 Lele31g1487 31 20206478 20208966 hybridization