Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1333 ATGACGGTGGCGGCAGGAATCGGTTACGCTCTACTAGCGTTAGGCCCATCTCTCTCCCTCTTCGTCTCTGTAATTTCCAGAAAGCCGTTCTTGATCCTCACTTTGCTCTCCAGTACGTTGGTGTGGCTTATAAGTTTGATTGTGCTGTCTGGAGTATGGAGGGGTTTCCTTCCTCTGAAAACCGCGACATGGTGGCCCTTTGGAATACTTATATTGACGTCCGTTGCTTTCCAAGAAGGGCTTCGTGTTTTATTCTGGAAAGTCTACAAGAGGCTGGAAGATATTTTAGATTCTTTTGCTGACAGAGCATCAAAACCACATCTTTCACTGACAGATAAGATGCAAATTGCTCTGGCCGGTGGTTTGGGTCATGGTGTGGCACATGCTGTGTTCTTCTGCCTCAGCCTGTTGACTCCTGCATTTGGTCCAGCTACATATTTTTCTGACAGATGCTCACAGATACCATTTTTCCTCCTTTCTGCAATTATCGCTCTTGCATTTGTCACAATTCACACTTTTTCAATGGTGATTGCATTTAATGGATACGCAGAGGGGAACAAACTGGACCAATATTCTGTTCCCATTGTCCACCTTGTTGCAGGGATGGTGACTCTAATAAACTTGGCAACTGGGGGTTGCGCTGTTGGAATTCCTCTTCTATATCTCATTGCAATGCTGACCTTATTCCACTGTGGAAGAATAGTATGGAGAAGGCTGACAGAAAACCAGAGCAGATAG 738 0.4526 MTVAAGIGYALLALGPSLSLFVSVISRKPFLILTLLSSTLVWLISLIVLSGVWRGFLPLKTATWWPFGILILTSVAFQEGLRVLFWKVYKRLEDILDSFADRASKPHLSLTDKMQIALAGGLGHGVAHAVFFCLSLLTPAFGPATYFSDRCSQIPFFLLSAIIALAFVTIHTFSMVIAFNGYAEGNKLDQYSVPIVHLVAGMVTLINLATGGCAVGIPLLYLIAMLTLFHCGRIVWRRLTENQSR 245
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1333 245 Pfam Aph-1 protein 2 234 IPR009294 GO:0016020|GO:0016485|GO:0043085
Lele30g1333 245 PANTHER GAMMA-SECRETASE SUBUNIT APH-1 1 244 IPR009294 GO:0016020|GO:0016485|GO:0043085
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele30g1333 Lele-ChrLele30 15639053 15647201 Dispersed/Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g1333 30 15639053 15647201 Lele31g1487 31 20206478 20208966 hybridization
Lele30g1333 30 15639053 15647201 Lele32g0061 32 356330 359208 hybridization