Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1314 ATGCTCCGTCGGCGACTCGTCGTCTTTCTTTCCCTCACTACTCTTCTTCTCCTGTCCTCATTCTCTCTCACTTTATGCAAGACAGTCGAAAACGACCGCGACGACGAAGATCTCAGCTTTCTCGAAGAAGCTGATGATAGCTCTGCCTCCCACCATGATTACCCAGATCTGGATCATTTCGAAGATTCTTCCGTTGGCGAACATGATTTTGAGGACTTCTCCGGCTTCGACGAGTCGGATGCCGATGCGGAGGGATACAAAGAACCCGAGGTGGATGACAAAGATGTTGTTGTATTGAAGGAGAGTAATTTCAGTGACGTTGTAAAGAAAAATCAGTTTGTTATGGTGGAATTTTACGCACCATGGTGTGGTCACTGCCAGGCTTTGGCTCCAGAGTATGCTGCTGCCGCCACCGAGTTGAAGGGCGAGAATGTGATTTTGGCGAAGGTGGATGCCGCGGAGGAGAATGAATTAGCCCAGGAGTACGAAGTTCAGGGATTCCCCACAGTCTATTTCTTTGTCGATGGGGTTCACAAGCCTTACAATGGCCAGAGGACCAAAGACGCTATAGTAACCTGGATTAAGAAGAAGATAGGACCCGGTCTTTCCAATATAACTACATTGGATGATGCCGAACGCATATTGACCTCTGAAAACAAAGTTGTTTTGGGCTTCCTCAACTCTTTAGTGGGTTCTGAGAGTGAAGAGCTAGATGCTGCATCCCGACTTGAGGATGATGTCAATTTTTATCAAACTGTTAATCCTGATGTGGCAAAGCTTTTCCATATTGACCCAAATGTCAAACGTCCTGCTTTGGTCCTCCTCAAGAAAGACGATGAGAAATTGAACCATTTTGATGGCCAATTTGTAAAATCTGCAATAGCAGAATTTGTGTTCTCGAACAAACTTCCGCTGGTCACAACTTTTACAAGAGAAAGTGCCCCATCAGTTTTTGACAACCCAATCAAGAAACAGAAGTTACTCCCAGCATTCCAAGAAGCAGCAAAATTTTTCAAGGGAAAGCTGATCTTTGTACGTGTGGAACTGGATAATGAAGATGTTGGAAAGCCGGTTTCCGAATTCTTTGGCATCAGTGGGATTTCTCCAAAGGTACTTGCATACACTGGAAATGATGATGGAAAGAAATTTGTGCTTGATGGAGAAGTGACCGTTGACAAAATTAAGGCATTTGGGAATGATTTCCTTGAAGACAAGCTAAAACCTTTCTACAAGTCAGATCCAGTTCCTGAAAATAATGACGGGGATGTGAAAATAGTCGTTGGGGATAACTTTGACGAGATTGTCTTGGATGAGTCTAAGGATGTTCTCCTTGAGATTTATGCACCCTGGTGCGGCCATTGCCAAGCTCTGGAACCAACATACAATAAGCTTGCTAAACATCTGCGTGGCATTGAGTCTCTTGTCATAGTCAAGATGGACGGAACAACAAATGAGCATCCAAGGGCAAAGACTGATGGATTCCCCACCATTCTCTTCTTCCCAGCTGGAAACAAGAGTTTTGACCCTATTACCGTTGATACAGATCGTACGGTGGTAGCCTTTTATAAGTTCCTGAAGAAACATGCATCGATCCCATTCAAGCTCCAGAAACCAACCACAAGCGCCAAATCCGCTAGTTCTGAATCCAAGGAGAGTCAGAGTGAGAGTAGCAGTAACGATGTGAAGGATGAATTGTAG 1698 0.4458 MLRRRLVVFLSLTTLLLLSSFSLTLCKTVENDRDDEDLSFLEEADDSSASHHDYPDLDHFEDSSVGEHDFEDFSGFDESDADAEGYKEPEVDDKDVVVLKESNFSDVVKKNQFVMVEFYAPWCGHCQALAPEYAAAATELKGENVILAKVDAAEENELAQEYEVQGFPTVYFFVDGVHKPYNGQRTKDAIVTWIKKKIGPGLSNITTLDDAERILTSENKVVLGFLNSLVGSESEELDAASRLEDDVNFYQTVNPDVAKLFHIDPNVKRPALVLLKKDDEKLNHFDGQFVKSAIAEFVFSNKLPLVTTFTRESAPSVFDNPIKKQKLLPAFQEAAKFFKGKLIFVRVELDNEDVGKPVSEFFGISGISPKVLAYTGNDDGKKFVLDGEVTVDKIKAFGNDFLEDKLKPFYKSDPVPENNDGDVKIVVGDNFDEIVLDESKDVLLEIYAPWCGHCQALEPTYNKLAKHLRGIESLVIVKMDGTTNEHPRAKTDGFPTILFFPAGNKSFDPITVDTDRTVVAFYKFLKKHASIPFKLQKPTTSAKSASSESKESQSESSSNDVKDEL 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1314 565 CDD PDI_b_family 203 301 - -
Lele31g1314 565 SUPERFAMILY Thioredoxin-like 418 530 IPR036249 -
Lele31g1314 565 MobiDBLite consensus disorder prediction 536 565 - -
Lele31g1314 565 ProSitePatterns Thioredoxin family active site. 443 461 IPR017937 -
Lele31g1314 565 TIGRFAM pdi_dom: protein disulfide-isomerase domain 99 197 IPR005788 GO:0003756
Lele31g1314 565 Gene3D Glutaredoxin 204 297 - -
Lele31g1314 565 FunFam Protein disulfide-isomerase 85 197 - -
Lele31g1314 565 Gene3D Glutaredoxin 418 531 - -
Lele31g1314 565 CDD PDI_b'_family 325 402 - -
Lele31g1314 565 Gene3D Glutaredoxin 80 203 - -
Lele31g1314 565 SUPERFAMILY Thioredoxin-like 205 313 IPR036249 -
Lele31g1314 565 FunFam protein disulfide-isomerase A2 198 302 - -
Lele31g1314 565 SUPERFAMILY Thioredoxin-like 89 199 IPR036249 -
Lele31g1314 565 CDD PDI_a_PDI_a'_C 423 525 - -
Lele31g1314 565 Pfam Thioredoxin 423 508 IPR013766 -
Lele31g1314 565 Pfam Thioredoxin 96 196 IPR013766 -
Lele31g1314 565 CDD PDI_a_family 97 194 - -
Lele31g1314 565 ProSitePatterns Thioredoxin family active site. 115 133 IPR017937 -
Lele31g1314 565 ProSiteProfiles Thioredoxin domain profile. 77 199 IPR013766 -
Lele31g1314 565 TIGRFAM ER_PDI_fam: protein disulfide isomerase 94 564 IPR005792 GO:0003756
Lele31g1314 565 FunFam Protein disulfide-isomerase 303 417 - -
Lele31g1314 565 FunFam Protein disulfide-isomerase 418 531 - -
Lele31g1314 565 PRINTS Thioredoxin family signature 163 174 - -
Lele31g1314 565 PRINTS Thioredoxin family signature 122 131 - -
Lele31g1314 565 PRINTS Thioredoxin family signature 114 122 - -
Lele31g1314 565 MobiDBLite consensus disorder prediction 536 554 - -
Lele31g1314 565 Pfam Thioredoxin-like domain 237 399 - -
Lele31g1314 565 ProSiteProfiles Thioredoxin domain profile. 401 530 IPR013766 -
Lele31g1314 565 PANTHER PROTEIN DISULFIDE ISOMERASE 7 563 - -
Lele31g1314 565 Gene3D Glutaredoxin 298 417 - -
Lele31g1314 565 SUPERFAMILY Thioredoxin-like 301 420 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1314 Lele-ChrLele31 19194449 19198063 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g1173 30 14623524 14627295 Lele31g1314 31 19194449 19198063 hybridization