Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1211 ATGATACTAGTATCACCTTCCTCCGTTTCAGATCTTCGTACTCATATTGCCCTCTACAGAAAATCTAGCTTCTTCCCGACTCGTGCCAGACTAATCCTTTGCAGTTTCATCGCTCCTCGATGCTCTTCGAGCGTGCAGGAGATTCAGAAGTCCTCTATCCCCTCCGACTCCGATGACAGACAGTTGAGTTCGGAGCTCTATACTTCAGCCCCATTCCCTCCCGTCAAGGTCGCCAAGAGAGTCGTGTTGGTCAGGCATGGCCAGAGCAACTGGAATGCCGAAGGCAGGATCCAAGGTAGCTCCAATTTCTCGGTGCTTACTAAGAAGGGTGAGGCTCAGGCCGAGACTTCGCGTCAAATGCTCATCGATGATAAGTTCGATGTTTGCTTCTCCAGTCCTTTGGCGCGATCAAAGAGAACGGCAGAAATAATCTGGGAAACTCGTGAACCGGGGATAATTACAGAATATGATTTGAGGGAAATCGATTTATATTCATTTCAAGGCCTTTTAAAGCATGAGGGGAAAGAAAGATTTGGCCCAGTTTATCGCCAATGGCAAGTGGACGCGCCAAATTTCAACGTGGATGGTCATTATCCGGTGAGAGAGCTATGGGGACGTGCCAGGAGCAGCTGGGATAAAATCTTAGCTCATGATAGCAGGTCCATTCTTGTGGTTGCTCACAACGCTGTCAATCAGGCTCTTGTTGCAACGGCAATTGGTTTAGGGACTGAGTACTTCAGAATTTTACTTCAGAGCAACTGTGGTGTGAGTGTCCTTGATTTCATCCCAAGATCTGAGGGTGGCTCTCCACATATTTGCCTTAACCGATTAAATCAGACCCCTGGGTCGCCTGTTGGTGGTGGGAAGTCTGCAGGTAGAAAGACAAATAAGCAGATAATACTTGTCTGTCATGGTTATACACAGGGCAATGCACAGGATGGTTTTCTTTTAGCTGGTGATCAACAATTGAATATGCTTGGTATTATACAGTCCCAGAAATCTGCAGAGCTACTTCTTGATTTGAAAGTGAATTCCATAATTAGCAGTCCTAACAAAGCCTGTATTGGGACAGCAAATGCCATCTCCCAAGTGCAAGAAGCTGCTGATTGCTTGGGTGCTGACTGTGTGCCGCGCTATGTTGAGATGAAGCAGATGGAGAACCTGGATTTGGAATCAATCTTTCACCAATCCAAGGATATATCGAATTTTTCGGCTATTCTCCCGGGCTGGTTAAATAAGATCGAGGACAGGGTGAGAACAACGTTATGGAATGAGTCTAGAAAGGCGTGGCAGTCTCTATTAGAAGAACTGTCAGATGAAGCATCATCTTCAGAAGTTGTGGTTGTAGTTGGTCATCCGGCCATGCACATAGCACTGATGGGGCAGTGCTTGAACGTGACAAAAGAATGGTTGGGATCATTTCATCTTGATGCAGGGAGTGTGAGTGTCATTGACTTCCCTGATGGACGCAAAGGAAGAGGCGTTATCAGGTGCATAAATTATACTGCACATTTGGGAAGATGGTCCATACCCATTACAAGATCAACAGAGGATAGCGAAGAGTTCTAA 1569 0.4621 MILVSPSSVSDLRTHIALYRKSSFFPTRARLILCSFIAPRCSSSVQEIQKSSIPSDSDDRQLSSELYTSAPFPPVKVAKRVVLVRHGQSNWNAEGRIQGSSNFSVLTKKGEAQAETSRQMLIDDKFDVCFSSPLARSKRTAEIIWETREPGIITEYDLREIDLYSFQGLLKHEGKERFGPVYRQWQVDAPNFNVDGHYPVRELWGRARSSWDKILAHDSRSILVVAHNAVNQALVATAIGLGTEYFRILLQSNCGVSVLDFIPRSEGGSPHICLNRLNQTPGSPVGGGKSAGRKTNKQIILVCHGYTQGNAQDGFLLAGDQQLNMLGIIQSQKSAELLLDLKVNSIISSPNKACIGTANAISQVQEAADCLGADCVPRYVEMKQMENLDLESIFHQSKDISNFSAILPGWLNKIEDRVRTTLWNESRKAWQSLLEELSDEASSSEVVVVVGHPAMHIALMGQCLNVTKEWLGSFHLDAGSVSVIDFPDGRKGRGVIRCINYTAHLGRWSIPITRSTEDSEEF 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1211 522 CDD HP_PGM_like 80 261 IPR013078 -
Lele31g1211 522 FunFam Putative 2-carboxy-D-arabinitol-1-phosphatase 290 509 - -
Lele31g1211 522 CDD HP_PGM_like 298 497 IPR013078 -
Lele31g1211 522 FunFam Phosphoglycerate mutase 79 283 - -
Lele31g1211 522 Gene3D - 79 281 IPR029033 -
Lele31g1211 522 SUPERFAMILY Phosphoglycerate mutase-like 79 275 IPR029033 -
Lele31g1211 522 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 295 490 - -
Lele31g1211 522 Pfam Histidine phosphatase superfamily (branch 1) 299 490 IPR013078 -
Lele31g1211 522 Pfam Histidine phosphatase superfamily (branch 1) 81 262 IPR013078 -
Lele31g1211 522 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 83 92 IPR001345 GO:0003824
Lele31g1211 522 SUPERFAMILY Phosphoglycerate mutase-like 297 510 IPR029033 -
Lele31g1211 522 SMART PGAM_5 298 459 IPR013078 -
Lele31g1211 522 SMART PGAM_5 80 234 IPR013078 -
Lele31g1211 522 Gene3D - 289 509 IPR029033 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1211 Lele-ChrLele31 18472616 18475998 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0330 29 2011735 2015123 Lele31g1211 31 18472616 18475998 hybridization
Lele30g1073 30 13940986 13944350 Lele31g1211 31 18472616 18475998 hybridization