Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0330 ATGATACTAGTATCACCTTCCTCCGTTTCAGATCTTCGTACTCATATTGCCCTCTACAGAAAATCTAGCTTCTTCCCTACTCGCGCCAGACTAATCCTTCGCAGTTTCATCGCTCCTCGATGCTCTTCGAGCGTGCAGGAGATTCAGAAGTCCTCTAGCCCCTCCGACTCCGATGACAGACAGTTGAGTTCGGAGCTCTATGCTTCAGCCCCATTCCCTCCCGTCAAGGTCGCCAAGAGAGTCGTGTTGGTCAGGCATGGCCAGAGCACCTGGAATGCCGAAGGCAGGATCCAAGGTAGCTCCAATTTCTCGGTGCTTACTAAGAAGGGTGAGGCTCAGGCCGAGACTTCGCGTCAAATGCTCATGGATGATAAGTTCGATGTTTGCTTCGCCAGTCCTTTGGCGCGATCAAAGAGAACGGCAGAAATAATCTGGGAAGCTCGTGAACCGGGGATAATTACAGAAGATGATTTGAGGGAAATCGATTTATATTCATTTCAAGGCCTCTTAAAGCATGAGGGGAAAGAAAGATTTGGCCCAGTTTATCGCCAATGGCAAGTGGACGCGCCAAATTTCAACGTGGATGGTCATTATCCGGTGAGAGAGCTATGGGAACGTGCCAGGAGCAGCTGGGATAAAATCTTAGCTCATGATAGCAGGTCCATTCTTGTGGTTGCTCACAACGCTGTCAATCAGGCTCTTGTTGCAACGGCAATTGGTTTAGGGACTGAGTACTTCAGAATTTTACTTCAGAGCAATTGTGGTGTGAGTGTCCTTGATTTCATCCCAAGATCTGAGGGTGGCTCTCCATATATTTGCCTTAACCGATTAAATCAGACCCCTGGATCGCCTGTCGGTGGTGGGAAGTCTGCAGGTAGAAAGACAAATAAGCAGATAATACTTGTCTGTCATGGTTATACACAGGGCAATGCAGAGGATGGTTTTCTTTTAGCTGGTGATCAACAATTGAATATGCTTGGTATTATACAGTCCCAGAAATCTGCAGAGCTACTTCTTGATTTGAAAGTGAATTCCATAATTAGCAGTCCTAACAAAGCCTGTATTGGAACAGCAAATGCTATCTCCCAAGTGCAAGAAGCTGCTGATTGCTTGGGTGCTGACTGTGTGCCCCGCTATGTTGAGATGAAGCAGATGGAGAACCTGGATTTGGAAACAATCTTTCAGCAATCCAAGGATATATCGAATTTTTCGGCTATTCACCCGGGCTGGTTAAATAAGATCGAGGACAGGGTAAGAACAACGTTATGGAATGAGTCTAGAAAGGCGTGGCAGTCTCTATTAGAAGAACTGTCAGATGAAGCATCATCTTCAGAAGTTGTGGTTGTAGTTGGTCATCCGGCCATGCACATAGCACTGATGGGGCAGTGCTTGAACGTGACAAAAGAATGGTTGGGATCATTTCATCTTGATGCAGGGAGTGTGAGTGTCATTGACTTCCCTGATGGACGCAAAGGAAGAGGCGTTATCAGGTGCATAAATTACACTGCACATTTGGGAAGATGGTCCATACCCATTACAAGATCAACAGAGGATAGCGAAGAGTTCTAA 1569 0.464 MILVSPSSVSDLRTHIALYRKSSFFPTRARLILRSFIAPRCSSSVQEIQKSSSPSDSDDRQLSSELYASAPFPPVKVAKRVVLVRHGQSTWNAEGRIQGSSNFSVLTKKGEAQAETSRQMLMDDKFDVCFASPLARSKRTAEIIWEAREPGIITEDDLREIDLYSFQGLLKHEGKERFGPVYRQWQVDAPNFNVDGHYPVRELWERARSSWDKILAHDSRSILVVAHNAVNQALVATAIGLGTEYFRILLQSNCGVSVLDFIPRSEGGSPYICLNRLNQTPGSPVGGGKSAGRKTNKQIILVCHGYTQGNAEDGFLLAGDQQLNMLGIIQSQKSAELLLDLKVNSIISSPNKACIGTANAISQVQEAADCLGADCVPRYVEMKQMENLDLETIFQQSKDISNFSAIHPGWLNKIEDRVRTTLWNESRKAWQSLLEELSDEASSSEVVVVVGHPAMHIALMGQCLNVTKEWLGSFHLDAGSVSVIDFPDGRKGRGVIRCINYTAHLGRWSIPITRSTEDSEEF 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0330 522 CDD HP_PGM_like 80 261 IPR013078 -
Lele29g0330 522 FunFam Putative 2-carboxy-D-arabinitol-1-phosphatase 290 509 - -
Lele29g0330 522 FunFam Phosphoglycerate mutase 79 283 - -
Lele29g0330 522 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 295 490 - -
Lele29g0330 522 CDD HP_PGM_like 298 497 IPR013078 -
Lele29g0330 522 Gene3D - 289 509 IPR029033 -
Lele29g0330 522 SMART PGAM_5 298 459 IPR013078 -
Lele29g0330 522 SMART PGAM_5 80 234 IPR013078 -
Lele29g0330 522 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 83 92 IPR001345 GO:0003824
Lele29g0330 522 SUPERFAMILY Phosphoglycerate mutase-like 297 510 IPR029033 -
Lele29g0330 522 Pfam Histidine phosphatase superfamily (branch 1) 299 490 IPR013078 -
Lele29g0330 522 Pfam Histidine phosphatase superfamily (branch 1) 81 262 IPR013078 -
Lele29g0330 522 Gene3D - 79 281 IPR029033 -
Lele29g0330 522 SUPERFAMILY Phosphoglycerate mutase-like 79 275 IPR029033 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0330 Lele-ChrLele29 2011735 2015123 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0330 29 2011735 2015123 Lele31g1211 31 18472616 18475998 hybridization
Lele29g0330 29 2011735 2015123 Lele32g0318 32 1984538 1986948 hybridization