Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0925 ATGTCCTCTCTCATGCATACAAATCCACCACCCACCTCCTCTCTACCGCCATACCCACTTCCCGTTTTATATCCCCACGTTCCTGTCTCTCTGTGTTTCATCTCCCACAAGCATCTCATTCATCAATCTCACAGAAGCATTTCATCAAACACAAAGCGATCACTTGTATCCAAGAAGTTGACAACAATGGCGTCGGAGCAAATATCTCGCACGGAGAACCCGAAGGCCGAGAGGGAGGTTCGTATTGAGAAGAATCGAGTCCCAAAGATGACCACCCACTTTGAGAATATTGCTGAACAGGTTAAGGAAGAATCGGCCACTCCGCAAGGGAGTATTCAGGAGTTACAGGGTGGGGAGTGCAGGAAGGAGCACGGTGGGAGAGCCATTGGGGAAATCGCTGGCACTGGTAAAGCAAGGGAGACTCATGAATTAAGGCCTCATTTCGAATCTCTTGCTGATAAGGTGCAAGGAGAAAAGCAGGAGAAGAAGGAATCGTATGCCGCGAAAGCCAGGAGTTATGCGCCTTCTCCAAATGTGGGCAAGTTCGAAGTGAGAGATGAAGAGAACAAGGATTCAGGTGGAGAAGCTAGAAGGAGAGATCAATCTGAACTGGAGAGTCGAACCAGAGTAGTAAATACGGGCAGACCAACGGAAAGCGGTGTGCAGAAACAACAGACAAGAGAAAGCAGAGGGCAAGTTGAAGCAGAGAAGGGACGAAGAAGCTTGGAGAACAGAGGGGAGAGAAGAGAAGTGAAACTGGGGAGAGGCACAGAGAGCGGAGGAGAAGTTAGAGGAACGGTTGGAGTTGAAACTCAATGTCCTACTGCTGTTATAAAGTGCACATTCGAAGGAGGAGAGAAGGAAGAAATAGGAAGAGACGCAAGAGAGAGAGCAAAACTAGAAGAAAACAGAGCAAGAGGTGGAGAGCAGGAGAAAGAATCGCAATCTACCTTGGAAGGGATTTCCAAATACAGAGGCCAAGTTCAAGAGAACACAATGGAAGCCGTAAGAGCAGCACAGGATCAGTATGAGAGAGCAAAGCAGGCAGCTAGTGAAACAGTGGGTTCTACAACACAAACAGCTCAAGAGAGAGCTGCAAAAGCAAAGGACATAGCAATGGAGAAAGCTGCTCAAGCCAAAGACGTGACCCTAGTCAAGGCTGCTCAAGCCAAAGATTACACACTAGAGAAGTCTGCTCAAGCAAAAGACGTGACCTTAGAGAAAGGCCAACAAGGATATGCTACTGCAAAAGACACCGTCTCAAGCGCAACCCAGACGGCTGCAGATTACACCTCTCAAGCAGCGGAGAAGGCAAAATCTGCAGGTAGCACTACTGCACAATATGTTGGGGAGAAAGCTGCTCAAGCCAAAGACGTGACACTAGACAAGGCTGCTCAAGCAAAAGACGTGACCTTAGAGAAGGGCCAACAAGGATATGCTACTGCAAAAGACACCATCTCAAGCGCAACACAGACGGCTGCAGATTACACCTCTCAAGCGGCGGAGAAGGCAAAATCTGCAGGTAGCACTACTGCACAATATGTTGGGGAGAAAGCTGCTCAAGCCAAAGACGTGACCTTAGAGAAGGGGCAACAAGGATATGCTACTGCAAAAGACACCATCTCAAGCGCAACCCAGAGGGCTGCAGATTACACCTCTCAAGCAGCGGAGAAGGCAAAATCTGCAGGTAGCACTACTGCACAATATGTTGGGGAGAAAGCTGCTCAAGCCAAAGACGTGACACTAGACAAGGCTGCTCAAGCAAAAGACGTGACCTTAGAGAAGGGCCAACAAGGATATGCTACTGCAAAAGACACCATCTCAAGCGCAACCCAGACGGCTGCAGATTATACCTCTCAAGCAGCGGACAAGGCAAAATCTGCAGGTAGCACTACTGCACAATATGTTGGGGAGAAAGCTGTTCAGGCTAAGGATGTCACCGTGGAGACTGGCAAGACTGCGGCGGAATATGCTGGAAAACAGGCGGCCGATCTGAAGGACAAGGCCACCGTGGCAGGGTGGACGGCGGCGCATTATTCCACGGAGAAGACTGTGGAGGGGACGAAAGCGGCGGCGAATATTGTTCAGGGAACGGCGGGATATGCTGTTGATAAGGCCAGTGATATTGCAGCCAAGTCATTGGATGCTGTCAAAGGGTTAGCTGCTAAAGCTGGGGAAACTGCTAAGGATTATACTGCGAGGAAGGAGGAGGAGGCAAAGAGGGAATATGAGACCAAAAAAGGGTCTCGGCCACAGGAAGAACAAGGCCAACAAGGAGGAGGCCTGCTCCAAAACATCACCGGAAGCTTTCAGGGCGGAGGAGGAGGAGGAGGGCAAACAAAAGAAGGTGGTGGGATCGGCGAAACTATAGGCCAATATGCACAGTCCACTAAAGACGCAGTAGGCCAATATGCGCAATCCACTAAAGAAGCAGTGGGAGATTTTGCTCAGACAATGAAGAAGCCATTGGATACTGCAGCACAAGGAGGAAGCGAGGTTATCGGAGCTGTCGGAGAAACTGTGGGTGAAATCGGAGAGACGATGATGAAACCAGCAGAGAGAGCCTCAGAACAAGGGCCAAAGGGTGAAGGGGTCATCGGTGCTATTGGAGAAACCATTGCAGAAATCGCGCAGACAACCAAGACCATGGTTGTGGGAGATGACGAAATAGAAGCAGGCTCAAAGCAGAGCATTGGATCAACAGAGTTTGATCGTGGCAACAACAACCAAGGAGGATTCATAGTTGAAGAACGTCGGAGAGAGACCTTTGAAGCTCGGAAAACCTGA 2787 0.497 MSSLMHTNPPPTSSLPPYPLPVLYPHVPVSLCFISHKHLIHQSHRSISSNTKRSLVSKKLTTMASEQISRTENPKAEREVRIEKNRVPKMTTHFENIAEQVKEESATPQGSIQELQGGECRKEHGGRAIGEIAGTGKARETHELRPHFESLADKVQGEKQEKKESYAAKARSYAPSPNVGKFEVRDEENKDSGGEARRRDQSELESRTRVVNTGRPTESGVQKQQTRESRGQVEAEKGRRSLENRGERREVKLGRGTESGGEVRGTVGVETQCPTAVIKCTFEGGEKEEIGRDARERAKLEENRARGGEQEKESQSTLEGISKYRGQVQENTMEAVRAAQDQYERAKQAASETVGSTTQTAQERAAKAKDIAMEKAAQAKDVTLVKAAQAKDYTLEKSAQAKDVTLEKGQQGYATAKDTVSSATQTAADYTSQAAEKAKSAGSTTAQYVGEKAAQAKDVTLDKAAQAKDVTLEKGQQGYATAKDTISSATQTAADYTSQAAEKAKSAGSTTAQYVGEKAAQAKDVTLEKGQQGYATAKDTISSATQRAADYTSQAAEKAKSAGSTTAQYVGEKAAQAKDVTLDKAAQAKDVTLEKGQQGYATAKDTISSATQTAADYTSQAADKAKSAGSTTAQYVGEKAVQAKDVTVETGKTAAEYAGKQAADLKDKATVAGWTAAHYSTEKTVEGTKAAANIVQGTAGYAVDKASDIAAKSLDAVKGLAAKAGETAKDYTARKEEEAKREYETKKGSRPQEEQGQQGGGLLQNITGSFQGGGGGGGQTKEGGGIGETIGQYAQSTKDAVGQYAQSTKEAVGDFAQTMKKPLDTAAQGGSEVIGAVGETVGEIGETMMKPAERASEQGPKGEGVIGAIGETIAEIAQTTKTMVVGDDEIEAGSKQSIGSTEFDRGNNNQGGFIVEERRRETFEARKT 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0925 928 PANTHER LATE EMBRYOGENESIS ABUNDANT DOMAIN-CONTAINING PROTEIN / LEA DOMAIN-CONTAINING PROTEIN 461 532 - -
Lele31g0925 928 MobiDBLite consensus disorder prediction 152 168 - -
Lele31g0925 928 MobiDBLite consensus disorder prediction 725 791 - -
Lele31g0925 928 Pfam Late embryogenesis abundant protein 372 409 IPR004238 -
Lele31g0925 928 MobiDBLite consensus disorder prediction 152 267 - -
Lele31g0925 928 MobiDBLite consensus disorder prediction 286 319 - -
Lele31g0925 928 MobiDBLite consensus disorder prediction 728 751 - -
Lele31g0925 928 MobiDBLite consensus disorder prediction 207 228 - -
Lele31g0925 928 MobiDBLite consensus disorder prediction 895 914 - -
Lele31g0925 928 Coils Coil 329 353 - -
Lele31g0925 928 MobiDBLite consensus disorder prediction 181 206 - -
Lele31g0925 928 MobiDBLite consensus disorder prediction 286 318 - -
Lele31g0925 928 MobiDBLite consensus disorder prediction 229 257 - -
Lele31g0925 928 MobiDBLite consensus disorder prediction 752 774 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0925 Lele-ChrLele31 16647413 16650308 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0799 09 6334412 6334822 Lele31g0925 31 16647413 16650308 CCT
Lele10g0728 10 5568834 5569244 Lele31g0925 31 16647413 16650308 CCT
Lele29g0614 29 3744598 3746915 Lele31g0925 31 16647413 16650308 hybridization
Lele30g0784 30 12169021 12171062 Lele31g0925 31 16647413 16650308 hybridization