Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0614 ATGGCGTCGGAGCAAATATCTCGCACGGAGAACACGAAGCCCGAGAGGGAGGTTGGTATTGAGAAGAATCGAGTCCCCAAGATGACCACCCACTTTGAGCATATTACTGAACAGGTTAAGGAAGAATCGGCCACTCCGCAAGGGAGTATTCAGGAGTTACAGGGTGGGGAGTACGGGAAAGATCACGGTGGGAGAGCCATTGGGGAAATCAGTGGCACTGGGAAAGCAAGGGAGACTCATGAATTAAGGCCTCATTTCGAATCTCTTGCTGATAAGGTGCAAGGAGAAAAGCAGGAGAAGAAGGAATCGTATGCCGCGAAAGCCAGGAGTTCTGCGCCTTCTCCAAATGTGGGCAAGTTCGAAGTGAGAGCTGAAGAGAATAAGGATTCAGCTGGAGAAGCTAGAAGGAGAGATCAATCTGAACTGGAGAGTCGAACCAGAGTAGTAAATACGGGCAGACCAACTGAAAGCGGTGTGCAGAACCAGAAACAACAGACAAGAGAAAGCAGAGGGCAGGTTGAAGCAGAGAAGGGACGAAGAAGCTTGGAGAACAGAGGGGAGAGAAGAGAAGTGAAACTGGGGAGAGACACAGAGAGCGGAGGAGAAGTTAAAGAAAGGGTTGGAGTTGAAACTCAAGGCCCTACTGCTGTTATAACGTGCACATTCGAAGGAGGAGAGAAGGAAGAAATAGGAAGAGACGCAAGAGAGAGAGCAAAACTAGAAGAAAACAGAGCAAGAGGTGGAGAGCAGGAGAAAGAATCGCCATCTACCTTGGAAGGGATTTCCAAATACAGAGGCCAAGTTCAAGAGAACACAATGGAAGCCGTAAGAGCAGCACAGGATCGGTATGAGAGAGCAAAGCAGGCATCTAGTGAAACAGTGGGTTCTACAACACAAACAGCTCAAGAGAAAGCTGCAAAAGCAAAGGACATAGCCATGGAGAAAGCTGCTCAAGTCAAAGACGTGACACTAGACAAGGCTGCTCAAGCCAAAGATTACACACTAGACAAGGCTGCTCAAGCGAAAGACGTGACCTTAGAGAAGGGCCAACAAGGATATGCTACTGCAAAAGACACCATGTCAAGCGCAACCCAGACGGCTGCAGATTACACCTCTCAAGCAGCGGAGAAGGCAAAATCTGCAGGTAGCACTACTGCACAATATGTTGGGGAGAAAGCTGCTCAAGCCAAAGACGTGACCTTAGAGAAAGGCCAACAAGGATATTCTACTGCAAAAGACACCATCTCAAGCGCAAATCAGACGGCTGCAGATTTCACATCTCAAGCAGCGGAGAAGGCAAAATCTGCAGGTAGCACTGCTGCACAATATGCTGGGGAGAAAGCTGTTCAGGCTAAGGATGTCACTGTGGAGACTGGCAAGACTGCGGCTGAATACGCTGGAAAACTGGCGGCTGATCTGAAGGACAAGGCCACCGTGGCAGGGTGGACGGCGGCGCATTATTCCACTGAGAAGACTGTGGAGGGGACGAAAGCGGCGGCGAATATTGTTCAGGGAACAGCGGGATATGCTGTTAGTAAGGCCAGTGACATTGCAGCCAAGTCATTGGATGCTGTCAAAGGGTTAGCTGCTAAAGCTGGGGAAACTGCCAAGGATTATACTGCGAGGAAGGAGGAGGAGTCAAAGAGGGAATATGATACCAAAAAAGGGTCTCAGCCACAGGAAGAACAAGGCCAACAAGGAGGAGGCCTGCTCCAAAACATCGCCGGAAGCTTTCAGGGCGGAGGAGGAGGAGGAGGGCAAACAAATGAAGGTGGTGGGATCAGCGAAACTATAGGCCAATATGCACAATCCACTAAAGACGCAGTAGGCCAATATCCGCAATCCACTAAAGAAGCAGTGGGAGAGTTTGCTCAGACAATGAAGAGGCCATTGGATACTGCAGCACAAGGAGGAAGCGAGGTTATCGGAGCTGTCGGAGAAACTGTGGGTGAAATCGGAGAGACGATGATGAAACCAGCAGAGAGAGCCTCAGAACAAGTGCCAAAGGGTGAAGGGGTCATTGGTGCTATTGGAGAAACCATTGCAGAAATCGCGCAGACAACCAAAACCATGGTTGTGGGAGATGACGAAATAGAAGCAGGCTCAAAGCAAAGCATTGGATCCACAGAGTTTGATCGTGGCAACAATAACCAAGGAGGTTTCATAGTTGAAGAACGTAGGAGAGAGACCTTTGAAGCTCGGAAAACCTGA 2211 0.4953 MASEQISRTENTKPEREVGIEKNRVPKMTTHFEHITEQVKEESATPQGSIQELQGGEYGKDHGGRAIGEISGTGKARETHELRPHFESLADKVQGEKQEKKESYAAKARSSAPSPNVGKFEVRAEENKDSAGEARRRDQSELESRTRVVNTGRPTESGVQNQKQQTRESRGQVEAEKGRRSLENRGERREVKLGRDTESGGEVKERVGVETQGPTAVITCTFEGGEKEEIGRDARERAKLEENRARGGEQEKESPSTLEGISKYRGQVQENTMEAVRAAQDRYERAKQASSETVGSTTQTAQEKAAKAKDIAMEKAAQVKDVTLDKAAQAKDYTLDKAAQAKDVTLEKGQQGYATAKDTMSSATQTAADYTSQAAEKAKSAGSTTAQYVGEKAAQAKDVTLEKGQQGYSTAKDTISSANQTAADFTSQAAEKAKSAGSTAAQYAGEKAVQAKDVTVETGKTAAEYAGKLAADLKDKATVAGWTAAHYSTEKTVEGTKAAANIVQGTAGYAVSKASDIAAKSLDAVKGLAAKAGETAKDYTARKEEESKREYDTKKGSQPQEEQGQQGGGLLQNIAGSFQGGGGGGGQTNEGGGISETIGQYAQSTKDAVGQYPQSTKEAVGEFAQTMKRPLDTAAQGGSEVIGAVGETVGEIGETMMKPAERASEQVPKGEGVIGAIGETIAEIAQTTKTMVVGDDEIEAGSKQSIGSTEFDRGNNNQGGFIVEERRRETFEARKT 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0614 736 MobiDBLite consensus disorder prediction 282 301 - -
Lele29g0614 736 MobiDBLite consensus disorder prediction 533 595 - -
Lele29g0614 736 MobiDBLite consensus disorder prediction 169 205 - -
Lele29g0614 736 MobiDBLite consensus disorder prediction 9 40 - -
Lele29g0614 736 PANTHER LATE EMBRYOGENESIS ABUNDANT DOMAIN-CONTAINING PROTEIN / LEA DOMAIN-CONTAINING PROTEIN 405 702 - -
Lele29g0614 736 Pfam Late embryogenesis abundant protein 320 358 IPR004238 -
Lele29g0614 736 Pfam Late embryogenesis abundant protein 309 349 IPR004238 -
Lele29g0614 736 MobiDBLite consensus disorder prediction 703 723 - -
Lele29g0614 736 MobiDBLite consensus disorder prediction 74 106 - -
Lele29g0614 736 MobiDBLite consensus disorder prediction 1 270 - -
Lele29g0614 736 Coils Coil 269 289 - -
Lele29g0614 736 MobiDBLite consensus disorder prediction 558 573 - -
Lele29g0614 736 MobiDBLite consensus disorder prediction 121 144 - -
Lele29g0614 736 MobiDBLite consensus disorder prediction 536 557 - -
Lele29g0614 736 MobiDBLite consensus disorder prediction 225 258 - -
Lele29g0614 736 MobiDBLite consensus disorder prediction 145 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0614 Lele-ChrLele29 3744598 3746915 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0799 09 6334412 6334822 Lele29g0614 29 3744598 3746915 CCT
Lele10g0728 10 5568834 5569244 Lele29g0614 29 3744598 3746915 CCT
Lele29g0614 29 3744598 3746915 Lele31g0925 31 16647413 16650308 hybridization
Lele29g0614 29 3744598 3746915 Lele32g0599 32 3702597 3704689 hybridization