Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0222 ATGGCGTGCATAAAAGGGGTAAATCGATCGGCGTCCGTGGCCCTGGCCCCGGATGCACCCTACATGGCGGCCGGAACCATGGCGGGGGCAGTTGATCTGTCCTTTAGCTCCTCCGCCAATCTCGAAATATTCAAACTTGATTTCCAGTCCGATGATCAGGAACTGCCCTTGGTCGCGGAGTGCCCGAGCTCCGAGCGGTTCAATCGTCTGTCTTGGGGAAAGAGTAGTTCTGCCTCTGAAGGTTTTTCCCTTGGGCTCGTTGCGGGGGGGCTAGTCGATGGCAATATTGGCCTCTGGAATCCTCTCACTTTGATCCGTTCGGAGGCAAAAGAAAGTGCTTTTCTTCAACATCTTGTGAGGCATAAAGGGCCAGTCCGTGGTCTTGAGTTTAATACCATTGCTCCAAATCTTCTTGCATCTGGGGCTGAGGATGGTGAAATTTGCATATGGGATTTGGCCAATCCTTCAGAGCCATCTCATTTTCCACCTCTAAGGGGTAGTGGCTCTGCTACCCAGGGTGAAATTTCATTTTCATCTTGGAATAGCAAAGTCCAACACATATTAGCATCAACTTCATATAATGGGACTACTGTGATCTGGGACCTAAGGAAGCAAAAGCCAGTGATAAGCTTTGCAGACTCAGTTAGAAGGCGATGTTCAGTTTTGCAGTGGAATCCTGATTTTGCCACTGAGCTAGTTGTTGCATCAGATGAAGATGGTTCTCCTGCTGTGATGCTTTGGGATATGAGGAATATAATGGCACCAATTAAAGAGTTTGTGGGACACAGTAGAGGTGTAATTGCCATGTCATGGTGTCCCTATGATAGCTATTATTTGCTTACCTGTGCCAAAGATAATCGAACCATATGCTGGGACACAACTTCTGGAGAGATTGTACGTGAATTGCCTGCTGGGACCAACTGGAATTTCGATGTGCATTGGTATCCTAAAATACCTGGAGTGATTTCAACATCTTCCTTTGATGGAAAAGTTGGCATCTACAATGTTGAGGGTTGCAGTTGGTATGGGGCTGGGCAAAATGATTTTGGTGCAGTATCTCTAAGAGCTCCAAAATGGTATAAACGCCCAGTTGGGGTGTCTTTTGGTTTTGGTGGCAAGCTTGTATCATTTAATTGCAAGTCATGTCCCACAAATGCTCCTGCTGGGGCTTCAGAGGTTTATGTGCATAATATGGTTACTGAACATAGTCTTGTGAGTCGTTCATCCGAATTTGAAGCTGCAATACATAATGGGGAAAGGTCTTTGCTGAGGGTTTTATGTGACAAAAAGTCTCAGGAATCAGAATCTGATGAAGAAAGAGAAACATGGGGCTTCTTGAAGGTTATGTTTGAAGATGATGGGACAGCACGAACGAAGCTGCTTGCACACCTTGGTTTTACTGTACCTATTGAAGAAAAAGTAGATGATCTAGCACAAGAAGTCAGTGCTATTGGACTTGATGGGACAGCTGTTGATAAAGTAGGACTTGGGCCTACTAAAGAATCCACTGTTTTCCCAGATGCTGGGGAGGACTTCTTTAACAATCTTCCTAGTCCCAGAGCTGAGACACCTTTATCCACTTCTGGTGGTAATGTGGATTATGCCAGTGGTTTGGACAAAATCCAAGAAGAGTTGGAAGTAGAGGAGAGCGATGATCCTACATTTGATGATAGTGTTCAGCGTGCATTAGTTGTTGGGGACTACGAAGGGGCAGTTGAACAATGCATATCTGCAAATAAGTGGGCTGATGCTCTAGTTATTGCTCATGTAGATAGTGCTTCACTATGGAAAAGTACACGAGACCAATACCTTAAGAGAATTAGATCACCATACTTGAAGATTGTCTCTGCGATGGTGAGCAAGGACCTCTTAAGCCTTGTGAACACTAGGCCTCTAAAATTTTGGAAAGAGACTCTTGCTCTTCTTTGTAATTTTGCTCAGAGTGATGAATGGGCAATGCTATGTGACACACTTGCTTCAAAACTCATGGAAGCTGGAAATACATTAGCTGCAACTCTCTGTTATATCTGTGCTGGCAGTATCGATAAAACGGTTGAAATTTGGTCAAAGAATCTGCAGATTGAGCATGAAGGAAAATTGTATGTTGATGTTCTCCAGGATTTGATGGAAAAAACTATTGTTCTTGCCTTAGCAACTGGGCAGAAGCAATTTAGTGCATCTCTTTGCAAGCTCGTCGAGAAATATGCTGAAATTTTAGCAAGTCAAGGAATGTTGACTACAGCAATGGAGTATATAAAGCTTTTGGGTTCTGCTGAACTGTCACCTGAACTTATAGTCTTAAAAGATCGAATTTCTCTTTCTACACAACCTGAGAAAGAAGTCCAGACTACTGAGCTTGAAAATACTCAGCGACAGATTGGATCATTTTACAGTGCTGATAATTCCAATTATGGTAGAAATTATTATCAGGAGTCAGTTTCGCCCCAAGTGCAGCATGGTGCTTCTGGAATTCCATATGATGAAAACTATCAACAGCCTTTTGATCCCTCATATGGAAGAGGATATGCTGGTTCTGCTCCATTTCAGCAACCCCAACAACCTAATTTGTTTGTTCCTTCACGGGCACCTCAGGTTCACCAAGCACCTCAGCCAAACTTAACTGCTCCTGTCACACAACCTCCTATGAGATCTTTTGTTCCTCACACTCCTCCAGCGCTAAGAAATGTCGAGCAATATCAGCAGCCAACATTGGGTTCTCAGTTGTATCCTGCAGCCGCCAATCCACCTTACCAACCTACACCCCCTGCCACATCTCAAATGGGTATGGTTCATGGCCAGAAATTGCCACATGTTGTGGCGCCAACCCCTAATCCAAGGGGATTCGCCCCAGTCCCCAGTTCTGGTGTCGCGCAAAGACCTGGGATTGGATCAATTCAGCCTCCCAGTCCCCCTCAGGCGGCTCCTGCACAGCCAGCTCCAGCACCAGCTGCTCCACCTCCAACTGTTCAAACAGCCGATACTTCAAATGTGCCTGCGCACCAAAAGCCCATTGTCACAACATTGACAAGGCTTTTCAACGAGACATCAGAAGCACTGGGAGGTCCACGTGCAAATCCAGCTAAAAAGCGGGAGATAGAAGACAACTCGAAGAAAATTGGAGGATTATTTGCGAAATTGAACAGTGGGGACATCTCTAAAAATGCCTCCGATAAGCTCCTTCAGCTCTGTCAGGCGTTAGACGAAGGCGATTTCAGTACAGCCCTACAAATTCAGGTCCTACTTACTACAACCGAATGGGATGAATGCCAGTCGTGGCTAGGTTCGCTGAAGCGAATGATCAAGACAAGGCAGAGTGTGAGATAA 3324 0.4525 MACIKGVNRSASVALAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSDDQELPLVAECPSSERFNRLSWGKSSSASEGFSLGLVAGGLVDGNIGLWNPLTLIRSEAKESAFLQHLVRHKGPVRGLEFNTIAPNLLASGAEDGEICIWDLANPSEPSHFPPLRGSGSATQGEISFSSWNSKVQHILASTSYNGTTVIWDLRKQKPVISFADSVRRRCSVLQWNPDFATELVVASDEDGSPAVMLWDMRNIMAPIKEFVGHSRGVIAMSWCPYDSYYLLTCAKDNRTICWDTTSGEIVRELPAGTNWNFDVHWYPKIPGVISTSSFDGKVGIYNVEGCSWYGAGQNDFGAVSLRAPKWYKRPVGVSFGFGGKLVSFNCKSCPTNAPAGASEVYVHNMVTEHSLVSRSSEFEAAIHNGERSLLRVLCDKKSQESESDEERETWGFLKVMFEDDGTARTKLLAHLGFTVPIEEKVDDLAQEVSAIGLDGTAVDKVGLGPTKESTVFPDAGEDFFNNLPSPRAETPLSTSGGNVDYASGLDKIQEELEVEESDDPTFDDSVQRALVVGDYEGAVEQCISANKWADALVIAHVDSASLWKSTRDQYLKRIRSPYLKIVSAMVSKDLLSLVNTRPLKFWKETLALLCNFAQSDEWAMLCDTLASKLMEAGNTLAATLCYICAGSIDKTVEIWSKNLQIEHEGKLYVDVLQDLMEKTIVLALATGQKQFSASLCKLVEKYAEILASQGMLTTAMEYIKLLGSAELSPELIVLKDRISLSTQPEKEVQTTELENTQRQIGSFYSADNSNYGRNYYQESVSPQVQHGASGIPYDENYQQPFDPSYGRGYAGSAPFQQPQQPNLFVPSRAPQVHQAPQPNLTAPVTQPPMRSFVPHTPPALRNVEQYQQPTLGSQLYPAAANPPYQPTPPATSQMGMVHGQKLPHVVAPTPNPRGFAPVPSSGVAQRPGIGSIQPPSPPQAAPAQPAPAPAAPPPTVQTADTSNVPAHQKPIVTTLTRLFNETSEALGGPRANPAKKREIEDNSKKIGGLFAKLNSGDISKNASDKLLQLCQALDEGDFSTALQIQVLLTTTEWDECQSWLGSLKRMIKTRQSVR 1107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0222 1107 MobiDBLite consensus disorder prediction 907 996 - -
Lele31g0222 1107 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 118 152 - -
Lele31g0222 1107 MobiDBLite consensus disorder prediction 964 987 - -
Lele31g0222 1107 MobiDBLite consensus disorder prediction 816 889 - -
Lele31g0222 1107 SMART WD40_4 204 248 IPR001680 GO:0005515
Lele31g0222 1107 SMART WD40_4 111 151 IPR001680 GO:0005515
Lele31g0222 1107 SMART WD40_4 54 100 IPR001680 GO:0005515
Lele31g0222 1107 SMART WD40_4 295 335 IPR001680 GO:0005515
Lele31g0222 1107 SMART WD40_4 161 201 IPR001680 GO:0005515
Lele31g0222 1107 SMART WD40_4 252 292 IPR001680 GO:0005515
Lele31g0222 1107 Pfam Sec23-binding domain of Sec16 559 757 IPR024298 -
Lele31g0222 1107 ProSiteProfiles Trp-Asp (WD) repeats profile. 259 301 IPR001680 GO:0005515
Lele31g0222 1107 FunFam Protein transport protein SEC31 homolog B 1 337 - -
Lele31g0222 1107 Pfam WD domain, G-beta repeat 115 151 IPR001680 GO:0005515
Lele31g0222 1107 Gene3D - 1 337 IPR015943 GO:0005515
Lele31g0222 1107 FunFam Protein transport protein SEC31 homolog B 353 775 - -
Lele31g0222 1107 MobiDBLite consensus disorder prediction 846 879 - -
Lele31g0222 1107 Gene3D Functional domain of the splicing factor Prp18 992 1107 - -
Lele31g0222 1107 ProSitePatterns Trp-Asp (WD) repeats signature. 138 152 IPR019775 -
Lele31g0222 1107 ProSiteProfiles Trp-Asp (WD) repeats profile. 118 160 IPR001680 GO:0005515
Lele31g0222 1107 PANTHER SEC31-RELATED PROTEIN 3 1104 IPR040251 GO:0006888
Lele31g0222 1107 FunFam Protein transport protein SEC31 homolog B 993 1107 - -
Lele31g0222 1107 SUPERFAMILY WD40 repeat-like 12 337 IPR036322 GO:0005515
Lele31g0222 1107 Gene3D - 352 775 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0222 Lele-ChrLele31 2270703 2288234 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0222 110 352 Miscellaneous Gene Families AT5G08390 24.490 2.96e-13 72.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g1353 29 20181540 20194060 Lele31g0222 31 2270703 2288234 hybridization