Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1381 ATGGGAGTGCTCTCGAACAAGATCGATCGGGAAGACCTGAAGCCCGGTGACCACATTTACTCCTGGAGGGATGCGCACATTTATGCGCATCATGGAATATATGTTGGGGAGGAAATGGTGATCCACTTCACTAGAGGAGGTCAAGAAATTGGTACAGGAACTATCCTGGACCGTCTCCTTTTGAGTTCATCTCCCACTCATTCTGCTGGCAATCCATGTCCAAAATGTGGCGACCAATCAAAGCTTCATGGTGTCCTTTCTTCATGCTTGGATTGTTTTCTTTTTGGCGGTCATCTATATCGCTTTGAGTATGGTGTATCACCAGCATTCTTTCTTGCCAAAGCCCGAGGAGGCACCTGCACACTCGCGACATCTGACCCACCCGAAGATGTCCTCCACCGTGCAAGATATCTTCTTCAAAACGGATTTGGCGTATACAATGTCTTCAAAAACAACTGTGAAGACTTTGCGATTTACTGCAAGACAGGCCTTCTTGTGATCACAAACATCAGCGTAGGCCGGAGTGGGCAGGCAGCATCATACGTGGCTGCTGTTAGTGCTGTAGTTTCTTCTCCACTCCGCTTCTTGACCACAAGTTGTAGTGGTCTGGCACTGGTTGGTTGTGGCATGTACTGTATTAGCCGTCTTGTTTCTGACATTGGAGTACGCCGTGATGTAGCCAAAGTGCCTGTGGAAAGGCTTATACATCCGTCTCTCTTGGATGAACCAGCCAACGCAGATGAGGTGAGAAGGCTTACAGATCCGTCTGGCTTGGATGAACCAGCCAAGGCAAATGAGGTGACAAAGGAAGACCAGATGCAGCTGCACAAAACCTGTGTATTGGATGGTGCGAAGTTTTAA 861 0.4832 MGVLSNKIDREDLKPGDHIYSWRDAHIYAHHGIYVGEEMVIHFTRGGQEIGTGTILDRLLLSSSPTHSAGNPCPKCGDQSKLHGVLSSCLDCFLFGGHLYRFEYGVSPAFFLAKARGGTCTLATSDPPEDVLHRARYLLQNGFGVYNVFKNNCEDFAIYCKTGLLVITNISVGRSGQAASYVAAVSAVVSSPLRFLTTSCSGLALVGCGMYCISRLVSDIGVRRDVAKVPVERLIHPSLLDEPANADEVRRLTDPSGLDEPAKANEVTKEDQMQLHKTCVLDGAKF 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1381 286 ProSiteProfiles LRAT domain profile. 20 169 IPR007053 -
Lele28g1381 286 Gene3D endopeptidase domain like (from Nostoc punctiforme) 4 169 - -
Lele28g1381 286 PANTHER OS05G0310600 PROTEIN 1 235 - -
Lele28g1381 286 Pfam Lecithin retinol acyltransferase 12 165 IPR007053 -
Lele28g1381 286 MobiDBLite consensus disorder prediction 251 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1381 Lele-ChrLele28 9948994 9951696 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele28g1381 28 9948994 9951696 Lele28g1381 28 9948994 9951696 ECH
Lele25g1378 25 9846236 9846962 Lele28g1381 28 9948994 9951696 hybridization
Lele26g1396 26 9791482 9795098 Lele28g1381 28 9948994 9951696 hybridization