Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1396 ATGGGAGTGCTCTCGAACAAGATCGATCGGGAAGAACTGAAGCCCGGTGACCACATTTACTCCTGGAGGGATGCACACATTTATGCGCATCATGGAATATATGTTGGCGAGGAAATGGTGATCCACTTCACTAGAGGAGGTCAAGAAATTGGTACAGGAACTATCTTGGACCGTCTCCTTGTGAGTTCATCTCCCATTCATTCTGCTGACAATCCATGTCCAAAATGTGGCGACCAATCAAAGCTTGATGGTGTCATTTCTTCATGCTTGGATTGTTTTCTTTTTGGCGGTCATCTATATCGCTTTGAGTATGGTGTATCACCAGCATTCTTTCTTGCCAAAGCTCGAGGAGGCACCTGCACACTCGCGACATCTGACCCATCCGAAGATGTCCTCCACCGTGCAAGATATCTTCTTCAAAATGGATTTGGCGTATACAATGTCTTCAAAAACAACTGTGAAGACTTTGCGATTTACTGCAAGACAGGCCTTCTCGTGATCACAAACATCAGTGTAGGCCGGAGTGGGCAGGCAGCATCATACGTGGCTGCTGTTAGTGCTGTAGTTTCTTCTCCACTCCGCTTCTTGACCACAAGTTTTGGTGGTCTGACACTGGTTGGTTGTGGCATGTACTGTATTAGCCGTCTTGTTTCTGACATTGGAGTACGCCGTGATGTAGCCAAAGTTCCTGTGAAAAGGCTTATACATCCGTCTCTCTTGGATGAACCAGCCAACGCAGATGAGGTGACAAGGCTTACAGATCCGTCGGGCTTGGATGAACCAGCCAAGGCAAATGAGGTGACAAAGGAAGACTAG 816 0.473 MGVLSNKIDREELKPGDHIYSWRDAHIYAHHGIYVGEEMVIHFTRGGQEIGTGTILDRLLVSSSPIHSADNPCPKCGDQSKLDGVISSCLDCFLFGGHLYRFEYGVSPAFFLAKARGGTCTLATSDPSEDVLHRARYLLQNGFGVYNVFKNNCEDFAIYCKTGLLVITNISVGRSGQAASYVAAVSAVVSSPLRFLTTSFGGLTLVGCGMYCISRLVSDIGVRRDVAKVPVKRLIHPSLLDEPANADEVTRLTDPSGLDEPAKANEVTKED 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1396 271 Gene3D endopeptidase domain like (from Nostoc punctiforme) 4 169 - -
Lele26g1396 271 ProSiteProfiles LRAT domain profile. 20 169 IPR007053 -
Lele26g1396 271 MobiDBLite consensus disorder prediction 246 271 - -
Lele26g1396 271 Pfam Lecithin retinol acyltransferase 12 165 IPR007053 -
Lele26g1396 271 PANTHER OS05G0310600 PROTEIN 1 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1396 Lele-ChrLele26 9791482 9795098 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g1396 26 9791482 9795098 Lele26g1396 26 9791482 9795098 ECH
Lele26g1396 26 9791482 9795098 Lele27g0710 27 15108535 15111104 hybridization
Lele26g1396 26 9791482 9795098 Lele28g1381 28 9948994 9951696 hybridization